RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 OR2T34Q8NGX1 318 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 SAP25Q8TEE9 199 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 ERCC4Q92889 916 aaPredicted RBP19.08■□□□□ 0.64
CCDC43-204ENST00000588687 SERPINB11Q96P15 392 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 FAM129BQ96TA1 746 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 TSG101Q99816 390 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 FTSJ1Q9UET6 329 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 ERVW-1Q9UQF0 538 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 NAALADL1Q9UQQ1 740 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 MGAQ8IWI9 3026 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 PTPRQQ9UMZ3 2332 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 ASXL3Q9C0F0 2248 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 FAM47DPA6NHR8 397 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 LUC7L3O95232 432 aaKnown RBP19.07■□□□□ 0.64
CCDC43-204ENST00000588687 IGLV3-25P01717 112 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 SRPRAP08240 638 aaKnown RBP19.07■□□□□ 0.64
CCDC43-204ENST00000588687 ADPRHP54922 357 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 CLDN6P56747 220 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 ST8SIA6P61647 398 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 CDH18Q13634 790 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 STILQ15468 1287 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 INAVAQ3KP66 663 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 PRAMEF14Q5SWL7 426 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 MMAAQ8IVH4 418 aaKnown RBP19.07■□□□□ 0.64
CCDC43-204ENST00000588687 ARHGEF19Q8IW93 802 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 CFAP52Q8N1V2 620 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 CARNMT1Q8N4J0 409 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 PDCD7Q8N8D1 485 aaKnown RBP19.07■□□□□ 0.64
CCDC43-204ENST00000588687 ADAM32Q8TC27 787 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 LRIG1Q96JA1 1093 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 NT5C1BQ96P26 610 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 NCKAP1Q9Y2A7 1128 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 PCDHB4Q9Y5E5 795 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 PCDHGA1Q9Y5H4 931 aa19.07■□□□□ 0.64
CCDC43-204ENST00000588687 EDDM13A0A1B0GTR0 161 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 TARSL2A2RTX5 802 aaKnown RBP19.06■□□□□ 0.64
CCDC43-204ENST00000588687 E9PAM4 449 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 LATO43561 262 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 RNASEH2AO75792 299 aaKnown RBP19.06■□□□□ 0.64
CCDC43-204ENST00000588687 CD44P16070 742 aaKnown RBP19.06■□□□□ 0.64
CCDC43-204ENST00000588687 DRD3P35462 400 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 GPD2P43304 727 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 CCR5P51681 352 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 C21orf59P57076 290 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 PPP2CBP62714 309 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 PPP2CAP67775 309 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 EIF4EBP2Q13542 120 aaPredicted RBP19.06■□□□□ 0.64
CCDC43-204ENST00000588687 SYPL2Q5VXT5 272 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 BEND5Q7L4P6 421 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 TMPRSS12Q86WS5 348 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 APCDD1Q8J025 514 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 PPM1KQ8N3J5 372 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 PTPRN2Q92932 1015 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 KREMEN1Q96MU8 473 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 MIS12Q9H081 205 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 SLCO3A1Q9UIG8 710 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 CNTN6Q9UQ52 1028 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 MYLKQ15746 1914 aa19.06■□□□□ 0.64
CCDC43-204ENST00000588687 LRRC72A6NJI9 287 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 MZF1P28698 734 aaPredicted RBP19.05■□□□□ 0.64
CCDC43-204ENST00000588687 EPHA8P29322 1005 aaPredicted RBP19.05■□□□□ 0.64
CCDC43-204ENST00000588687 SLC8A1P32418 973 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 PSMD8P48556 350 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 ACADVLP49748 655 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 STK19P49842 368 aaPredicted RBP19.05■□□□□ 0.64
CCDC43-204ENST00000588687 METAP1P53582 386 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 ECT2LQ008S8 904 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 GCNT1Q02742 428 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 DNAJC3Q13217 504 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 CCDC157Q569K6 752 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 SFMBT2Q5VUG0 894 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 KANSL1Q7Z3B3 1105 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 GANCQ8TET4 914 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 TSC1Q92574 1164 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 DDX50Q9BQ39 737 aaKnown RBP19.05■□□□□ 0.64
CCDC43-204ENST00000588687 METTL14Q9HCE5 456 aaKnown RBP19.05■□□□□ 0.64
CCDC43-204ENST00000588687 CYTH4Q9UIA0 394 aa19.05■□□□□ 0.64
CCDC43-204ENST00000588687 DOCK9Q9BZ29 2069 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 TYW5A2RUC4 315 aaKnown RBP19.04■□□□□ 0.64
CCDC43-204ENST00000588687 PLK4O00444 970 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 ENC1O14682 589 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 RNASEH1O60930 286 aaKnown RBP19.04■□□□□ 0.64
CCDC43-204ENST00000588687 MOCS2O96007 188 aaPredicted RBP19.04■□□□□ 0.64
CCDC43-204ENST00000588687 VAV1P15498 845 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 CD38P28907 300 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 NXPH1P58417 271 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 PITX1P78337 314 aaPredicted RBP19.04■□□□□ 0.64
CCDC43-204ENST00000588687 TTI2Q6NXR4 508 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 RRAGAQ7L523 313 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 STK40Q8N2I9 435 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 FRS2Q8WU20 508 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 CCDC34Q96HJ3 373 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 CEP63Q96MT8 703 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 PRMT1Q99873 361 aaKnown RBP19.04■□□□□ 0.64
CCDC43-204ENST00000588687 ATP6V1DQ9Y5K8 247 aa19.04■□□□□ 0.64
CCDC43-204ENST00000588687 ASH1LQ9NR48 2969 aaKnown RBP19.04■□□□□ 0.64
CCDC43-204ENST00000588687 P4HA2O15460 535 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 RFPL3O75679 317 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 ADH1BP00325 375 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 GOT1P17174 413 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms