RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 TKTL2Q9H0I9 626 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 VANGL2Q9ULK5 521 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 SLC6A14Q9UN76 642 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 ERVW-1Q9UQF0 538 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 HS3ST4Q9Y661 456 aa20.18■□□□□ 0.82
TPM4-208ENST00000588410 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.17■□□□□ 0.82
TPM4-208ENST00000588410 RNASEH1O60930 286 aaKnown RBP20.17■□□□□ 0.82
TPM4-208ENST00000588410 DNTTP04053 509 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 SRPRAP08240 638 aaKnown RBP20.17■□□□□ 0.82
TPM4-208ENST00000588410 ATP1A3P13637 1013 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 PDGFRAP16234 1089 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 NNMTP40261 264 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 CXCR3P49682 368 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 ATXN3P54252 364 aaPredicted RBP20.17■□□□□ 0.82
TPM4-208ENST00000588410 FMO1Q01740 532 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 ZBTB16Q05516 673 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 GFPT1Q06210 699 aaPredicted RBP20.17■□□□□ 0.82
TPM4-208ENST00000588410 ZNF177Q13360 481 aaPredicted RBP20.17■□□□□ 0.82
TPM4-208ENST00000588410 PEAR1Q5VY43 1037 aaPredicted RBP20.17■□□□□ 0.82
TPM4-208ENST00000588410 SLC23A3Q6PIS1 610 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 FAM124AQ86V42 546 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 CADM4Q8NFZ8 388 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 NT5C3BQ969T7 300 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 PGAP3Q96FM1 320 aaPredicted RBP20.17■□□□□ 0.82
TPM4-208ENST00000588410 BPIFA3Q9BQP9 254 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 ARHGEF38Q9NXL2 777 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 SUSD2Q9UGT4 822 aa20.17■□□□□ 0.82
TPM4-208ENST00000588410 ADCY5O95622 1261 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 IGLV3-19P01714 112 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 CYP1A1P04798 512 aaPredicted RBP20.16■□□□□ 0.82
TPM4-208ENST00000588410 GNSP15586 552 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 CHRNB2P17787 502 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 TFE3P19532 575 aaPredicted RBP20.16■□□□□ 0.82
TPM4-208ENST00000588410 FLT3P36888 993 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 GGCXP38435 758 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 CTSOP43234 321 aaPredicted RBP20.16■□□□□ 0.82
TPM4-208ENST00000588410 RPS14P62263 151 aaKnown RBP20.16■□□□□ 0.82
TPM4-208ENST00000588410 CENPCQ03188 943 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 SULT2A1Q06520 285 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 HNRNPA1L2Q32P51 320 aaKnown RBP20.16■□□□□ 0.82
TPM4-208ENST00000588410 TTC31Q49AM3 519 aaPredicted RBP20.16■□□□□ 0.82
TPM4-208ENST00000588410 OTUD1Q5VV17 481 aaPredicted RBP20.16■□□□□ 0.82
TPM4-208ENST00000588410 ZNF776Q68DI1 518 aaPredicted RBP20.16■□□□□ 0.82
TPM4-208ENST00000588410 LRSAM1Q6UWE0 723 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 LRRC31Q6UY01 552 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 APCDD1Q8J025 514 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 IGSF8Q969P0 613 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 MRGPRX3Q96LB0 322 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 HSD3B7Q9H2F3 369 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 MTG2Q9H4K7 406 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 METTL5Q9NRN9 209 aaKnown RBP20.16■□□□□ 0.82
TPM4-208ENST00000588410 SEPT11Q9NVA2 429 aaKnown RBP20.16■□□□□ 0.82
TPM4-208ENST00000588410 CEP250Q9BV73 2442 aa20.16■□□□□ 0.82
TPM4-208ENST00000588410 SDK1Q7Z5N4 2213 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 CLDN11O75508 207 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 SERPINF2P08697 491 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 CCDC172P0C7W6 258 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 ENGP17813 658 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 MMP8P22894 467 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 RDXP35241 583 aaKnown RBP20.15■□□□□ 0.82
TPM4-208ENST00000588410 MAPK8P45983 427 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 NSFP46459 744 aaKnown RBP20.15■□□□□ 0.82
TPM4-208ENST00000588410 SFSWAPQ12872 951 aaKnown RBP20.15■□□□□ 0.82
TPM4-208ENST00000588410 FILIP1LQ4L180 1135 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 ACBD5Q5T8D3 534 aaPredicted RBP20.15■□□□□ 0.82
TPM4-208ENST00000588410 ARCQ7LC44 396 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 APTXQ7Z2E3 356 aaKnown RBP20.15■□□□□ 0.82
TPM4-208ENST00000588410 DHX40Q8IX18 779 aaKnown RBP20.15■□□□□ 0.82
TPM4-208ENST00000588410 SLC30A5Q8TAD4 765 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 GANCQ8TET4 914 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 MYO19Q96H55 970 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 CFAP57Q96MR6 1250 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 C11orf70Q9BRQ4 267 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 TMEM59LQ9UK28 342 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 NCKAP1Q9Y2A7 1128 aa20.15■□□□□ 0.82
TPM4-208ENST00000588410 DMXL1Q9Y485 3027 aa20.14■□□□□ 0.82
TPM4-208ENST00000588410 EML5Q05BV3 1969 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 EDDM13A0A1B0GTR0 161 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 TTC34A8MYJ7 566 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 SIN3BO75182 1162 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 MZF1P28698 734 aaPredicted RBP20.14■□□□□ 0.81
TPM4-208ENST00000588410 ZNF165P49910 485 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 CDH4P55283 916 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 UAP1L1Q3KQV9 507 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 PHLDB2Q86SQ0 1253 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 C14orf80Q86SX3 495 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 RPL10LQ96L21 214 aaKnown RBP20.14■□□□□ 0.81
TPM4-208ENST00000588410 GTPBP2Q9BX10 602 aaKnown RBP20.14■□□□□ 0.81
TPM4-208ENST00000588410 ADAM33Q9BZ11 813 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 BTBD1Q9H0C5 482 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 MIR1-1HGQ9H1L0 117 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 RSPH9Q9H1X1 276 aaPredicted RBP20.14■□□□□ 0.81
TPM4-208ENST00000588410 SLCO3A1Q9UIG8 710 aa20.14■□□□□ 0.81
TPM4-208ENST00000588410 TARSL2A2RTX5 802 aaKnown RBP20.13■□□□□ 0.81
TPM4-208ENST00000588410 CDX4O14627 284 aaPredicted RBP20.13■□□□□ 0.81
TPM4-208ENST00000588410 TM4SF5O14894 197 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 SYPP08247 313 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 MAOBP27338 520 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 NUMBP49757 651 aa20.13■□□□□ 0.81
TPM4-208ENST00000588410 PLK1P53350 603 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms