RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 TXNDC11Q6PKC3 985 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 C14orf80Q86SX3 495 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 ZNF687Q8N1G0 1237 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 KDM1BQ8NB78 822 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 FAM71BQ8TC56 605 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 HSPH1Q92598 858 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 TTC17Q96AE7 1141 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 CHFRQ96EP1 664 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 ALS2CR12Q96Q35 445 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 MAK16Q9BXY0 300 aaKnown RBP9.33□□□□□ -0.92
CIRBP-218ENST00000588344 RAB6CQ9H0N0 254 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 MAGEH1Q9H213 219 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 LMAN1LQ9HAT1 526 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 TMEM248Q9NWD8 314 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 ELOVL2Q9NXB9 296 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 AMFRQ9UKV5 643 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 NDRG2Q9UN36 371 aaKnown RBP9.33□□□□□ -0.92
CIRBP-218ENST00000588344 PPP2R2CQ9Y2T4 447 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 ZNF638Q14966 1978 aaKnown RBP9.33□□□□□ -0.92
CIRBP-218ENST00000588344 DOCK8Q8NF50 2099 aa9.33□□□□□ -0.92
CIRBP-218ENST00000588344 NUP210Q8TEM1 1887 aaPredicted RBP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 MUC3AQ02505 3323 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 MACROD2A1Z1Q3 448 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 SHISA7A6NL88 538 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 PRR33A8MZF0 331 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 CHURC1-FNTBB4DL54 471 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 FAM72CH0Y354 149 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 BUB1O43683 1085 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 CNTN5O94779 1100 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 ZRANB2O95218 330 aaKnown RBP eCLIP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 PABPC1P11940 636 aaKnown RBP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 ZFXP17010 805 aaPredicted RBP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 POLR2EP19388 210 aaKnown RBP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 AOC1P19801 751 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 CD72P21854 359 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 IL1R2P27930 398 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 HLA-FP30511 346 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 NNMTP40261 264 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 VASPP50552 380 aaPredicted RBP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 SGSHP51688 502 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 NDST2P52849 883 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 CDH6P55285 790 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 COPS2P61201 443 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 SLC20A2Q08357 652 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 PARP15Q460N3 678 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 PPP6R3Q5H9R7 873 aaPredicted RBP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 IER5LQ5T953 404 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 FAM72AQ5TYM5 149 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 FAM72DQ6L9T8 149 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 FSTL4Q6MZW2 842 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 RFX8Q6ZV50 586 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 CYP4V2Q6ZWL3 525 aaPredicted RBP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 PEX26Q7Z412 305 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 METTL3Q86U44 580 aaKnown RBP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 NLRP14Q86W24 1093 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 FAM72BQ86X60 149 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 LRRC49Q8IUZ0 686 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 RCOR2Q8IZ40 523 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 PHTF2Q8N3S3 785 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 FBXL6Q8N531 539 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 UBL4BQ8N7F7 174 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 RTL3Q8N8U3 475 aaKnown RBP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 LRRC57Q8N9N7 239 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 TRIM58Q8NG06 486 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 ACDQ96AP0 544 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 MYEOVQ96EZ4 313 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 PEBP4Q96S96 227 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 ZNF670Q9BS34 389 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 C2orf49Q9BVC5 232 aaPredicted RBP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 EPHX3Q9H6B9 360 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 FBRSL1Q9HCM7 1045 aaKnown RBP9.32□□□□□ -0.92
CIRBP-218ENST00000588344 TMPRSS4Q9NRS4 437 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 ABCB8Q9NUT2 735 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 SALL4Q9UJQ4 1053 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 GGA2Q9UJY4 613 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 HPCAL4Q9UM19 191 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 GUCA1BQ9UMX6 200 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 TFR2Q9UP52 801 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 SLC8A2Q9UPR5 921 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 PCDHA3Q9Y5H8 950 aa9.32□□□□□ -0.92
CIRBP-218ENST00000588344 ANAPC1Q9H1A4 1944 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 GRID2IPA4D2P6 1211 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 ZSCAN5CA6NGD5 496 aaPredicted RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 K7EQS6 105 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 DLL1O00548 723 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 ZBTB24O43167 697 aaPredicted RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 RAMP2O60895 175 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 PALMO75781 387 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 EGFP01133 1207 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 RHOCP08134 193 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 SRPRAP08240 638 aaKnown RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 DLDP09622 509 aaKnown RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 HNRNPLP14866 589 aaKnown RBP eCLIP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 KDELR1P24390 212 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 CTNNA2P26232 953 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 TARSP26639 723 aaKnown RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 CTNNA1P35221 906 aaKnown RBP9.31□□□□□ -0.92
CIRBP-218ENST00000588344 SERPINB6P35237 376 aa9.31□□□□□ -0.92
CIRBP-218ENST00000588344 ARSEP51690 589 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms