RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 PRMT1Q99873 361 aaKnown RBP19.41■□□□□ 0.7
TRIM47-205ENST00000587774 PABPC3Q9H361 631 aaKnown RBP19.41■□□□□ 0.7
TRIM47-205ENST00000587774 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRIM47-205ENST00000587774 COX16Q9P0S2 106 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 KIAA1522Q9P206 1035 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-205ENST00000587774 SERGEFQ9UGK8 458 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 CEP83Q9Y592 693 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 ITIH6Q6UXX5 1313 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 ITPR1Q14643 2758 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 TTC34A8MYJ7 566 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 KCNU1A8MYU2 1149 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 F5H5T6 163 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 HSF2BPO75031 334 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 GRAP2O75791 330 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 MOCS3O95396 460 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 SRPRAP08240 638 aaKnown RBP19.4■□□□□ 0.7
TRIM47-205ENST00000587774 CSNK1EP49674 416 aaKnown RBP19.4■□□□□ 0.7
TRIM47-205ENST00000587774 ARID5BQ14865 1188 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 TRIP6Q15654 476 aaKnown RBP19.4■□□□□ 0.7
TRIM47-205ENST00000587774 MAN2A1Q16706 1144 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 HLA-BQ31612 363 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 DPCR1Q3MIW9 517 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 LAYNQ6UX15 382 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 ATP6V0D2Q8N8Y2 350 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 KDM1BQ8NB78 822 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 SGK2Q9HBY8 427 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 TM9SF3Q9HD45 589 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 TM7SF3Q9NS93 570 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 DDIT4Q9NX09 232 aa19.4■□□□□ 0.7
TRIM47-205ENST00000587774 ARID1BQ8NFD5 2236 aaPredicted RBP19.39■□□□□ 0.69
TRIM47-205ENST00000587774 MID1O15344 667 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 FSBPO95073 299 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 TRIM16O95361 564 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 ERBB2P04626 1255 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 GLI1P08151 1106 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 ZNF883P0CG24 379 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 STK19P49842 368 aaPredicted RBP19.39■□□□□ 0.69
TRIM47-205ENST00000587774 CDK17Q00537 523 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 ECT2LQ008S8 904 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 PTK2Q05397 1052 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 CST6Q15828 149 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 TPD52L1Q16890 204 aaPredicted RBP19.39■□□□□ 0.69
TRIM47-205ENST00000587774 ZNF423Q2M1K9 1284 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 C9orf64Q5T6V5 341 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 IL27RAQ6UWB1 636 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 OLFML1Q6UWY5 402 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 USP30Q70CQ3 517 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 SLC47A2Q86VL8 602 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 CCAR2Q8N163 923 aaKnown RBP19.39■□□□□ 0.69
TRIM47-205ENST00000587774 RPL10LQ96L21 214 aaKnown RBP19.39■□□□□ 0.69
TRIM47-205ENST00000587774 ORAI3Q9BRQ5 295 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 CLSTN2Q9H4D0 955 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 ASNSD1Q9NWL6 643 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 FBXL12Q9NXK8 326 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 DNAJC12Q9UKB3 198 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 PCOLCE2Q9UKZ9 415 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 ZMIZ1Q9ULJ6 1067 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 SCML1Q9UN30 329 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 PCDHB9Q9Y5E1 797 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 TRPM6Q9BX84 2022 aa19.39■□□□□ 0.69
TRIM47-205ENST00000587774 EDDM13A0A1B0GTR0 161 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 A0A1B0GVM2 712 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 TCAF2A6NFQ2 919 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 CBFA2T3O75081 653 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 IGHV4-34P06331 123 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 FTH1P19P0C7X4 201 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 PDGFRAP16234 1089 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 ABCB4P21439 1286 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 CD27P26842 260 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 CCR1P32246 355 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 CLCN1P35523 988 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 GRIA4P48058 902 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 CENPCQ03188 943 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 PTPN20Q4JDL3 420 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 HSP90AA4PQ58FG1 418 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 EFHC1Q5JVL4 640 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 TTC39BQ5VTQ0 682 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-205ENST00000587774 RNF219Q5W0B1 726 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-205ENST00000587774 C11orf57Q6ZUT1 292 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-205ENST00000587774 RAB44Q7Z6P3 723 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-205ENST00000587774 MMAAQ8IVH4 418 aaKnown RBP19.38■□□□□ 0.69
TRIM47-205ENST00000587774 CHCHD4Q8N4Q1 142 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 KDF1Q8NAX2 398 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-205ENST00000587774 GANCQ8TET4 914 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 NOX5Q96PH1 765 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 OSGEPQ9NPF4 335 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 PLCB1Q9NQ66 1216 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 CHMP5Q9NZZ3 219 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 SLCO3A1Q9UIG8 710 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 NCKAP1Q9Y2A7 1128 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 MSRB2Q9Y3D2 182 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 SNX11Q9Y5W9 270 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 ZFYVE26Q68DK2 2539 aa19.38■□□□□ 0.69
TRIM47-205ENST00000587774 ADAMTS20P59510 1910 aa19.37■□□□□ 0.69
TRIM47-205ENST00000587774 A0A1W2PP55 124 aa19.37■□□□□ 0.69
TRIM47-205ENST00000587774 TARSL2A2RTX5 802 aaKnown RBP19.37■□□□□ 0.69
TRIM47-205ENST00000587774 TMEM8BA6NDV4 472 aa19.37■□□□□ 0.69
TRIM47-205ENST00000587774 FAM47DPA6NHR8 397 aa19.37■□□□□ 0.69
TRIM47-205ENST00000587774 FOXN3O00409 490 aaPredicted RBP19.37■□□□□ 0.69
TRIM47-205ENST00000587774 RNASEH1O60930 286 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms