RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 PHOSPHO2Q8TCD6 241 aa20.38■□□□□ 0.85
TRIM47-204ENST00000587339 DEPDC1BQ8WUY9 529 aa20.38■□□□□ 0.85
TRIM47-204ENST00000587339 SERPINB12Q96P63 405 aa20.38■□□□□ 0.85
TRIM47-204ENST00000587339 CCDC77Q9BR77 488 aa20.38■□□□□ 0.85
TRIM47-204ENST00000587339 A0A087WUV0 522 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-204ENST00000587339 DFFAO00273 331 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 PTPN3P26045 913 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 GABPB1Q06547 395 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-204ENST00000587339 ZNF33AQ06730 810 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 LONRF1Q17RB8 773 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 DNAJB7Q7Z6W7 309 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-204ENST00000587339 FBXO36Q8NEA4 188 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 SP7Q8TDD2 431 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-204ENST00000587339 PGM2Q96G03 612 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 ZYG11BQ9C0D3 744 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 VPS37BQ9H9H4 285 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 KLHL8Q9P2G9 620 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-204ENST00000587339 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-204ENST00000587339 COCHO43405 550 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 CXCL14O95715 111 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 SPATA31D3P0C874 917 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 TPSB2P20231 275 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 PPP3CCP48454 512 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 LMAN1P49257 510 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 STAT4Q14765 748 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 TPSAB1Q15661 275 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 PARP6Q2NL67 630 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 RAP1GAP2Q684P5 730 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 SPATA31D4Q6ZUB0 917 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 ZNF683Q8IZ20 524 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 MCUQ8NE86 351 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 PSMG2Q969U7 264 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 NDFIP2Q9NV92 336 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 DONSONQ9NYP3 566 aa20.37■□□□□ 0.85
TRIM47-204ENST00000587339 PPARGC1AQ9UBK2 798 aaKnown RBP20.37■□□□□ 0.85
TRIM47-204ENST00000587339 UXTQ9UBK9 157 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-204ENST00000587339 NOVA2Q9UNW9 492 aaKnown RBP20.37■□□□□ 0.85
TRIM47-204ENST00000587339 LCHNA4D1U4 455 aa20.36■□□□□ 0.85
TRIM47-204ENST00000587339 WASH4PA8MWX3 477 aa20.36■□□□□ 0.85
TRIM47-204ENST00000587339 RGS16O15492 202 aaPredicted RBP20.36■□□□□ 0.85
TRIM47-204ENST00000587339 AVILO75366 819 aa20.36■□□□□ 0.85
TRIM47-204ENST00000587339 KCNQ1P51787 676 aa20.36■□□□□ 0.85
TRIM47-204ENST00000587339 FBXL22Q6P050 247 aa20.36■□□□□ 0.85
TRIM47-204ENST00000587339 CAPN12Q6ZSI9 719 aa20.36■□□□□ 0.85
TRIM47-204ENST00000587339 ARHGAP12Q8IWW6 846 aa20.36■□□□□ 0.85
TRIM47-204ENST00000587339 ATPAF2Q8N5M1 289 aa20.36■□□□□ 0.85
TRIM47-204ENST00000587339 ATP11CQ8NB49 1132 aa20.36■□□□□ 0.85
TRIM47-204ENST00000587339 VAT1Q99536 393 aa20.36■□□□□ 0.85
TRIM47-204ENST00000587339 ZMYND8Q9ULU4 1186 aaPredicted RBP20.36■□□□□ 0.85
TRIM47-204ENST00000587339 IGLV3-10A0A075B6K4 115 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 F5H423 210 aaPredicted RBP20.35■□□□□ 0.85
TRIM47-204ENST00000587339 TGM5O43548 720 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 IVLP07476 585 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 RHOQP17081 205 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 CCDC38Q502W7 563 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 DNAJC21Q5F1R6 531 aaKnown RBP20.35■□□□□ 0.85
TRIM47-204ENST00000587339 ITIH5Q86UX2 942 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 CAND1Q86VP6 1230 aaKnown RBP20.35■□□□□ 0.85
TRIM47-204ENST00000587339 NLRP14Q86W24 1093 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 PALM2Q8IXS6 379 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 TSGA13Q96PP4 275 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 WDR83Q9BRX9 315 aaKnown RBP20.35■□□□□ 0.85
TRIM47-204ENST00000587339 SLC39A8Q9C0K1 460 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 MTIF3Q9H2K0 278 aaKnown RBP20.35■□□□□ 0.85
TRIM47-204ENST00000587339 IGSF9Q9P2J2 1179 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 TRHDEQ9UKU6 1024 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 TCEA3O75764 348 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 ADH1AP07327 375 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 NR1D1P20393 614 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 CCNCP24863 283 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 PSMB4P28070 264 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 CTNNB1P35222 781 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 BMPR1AP36894 532 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 HARS2P49590 506 aaKnown RBP20.35■□□□□ 0.85
TRIM47-204ENST00000587339 SARNPP82979 210 aaKnown RBP20.35■□□□□ 0.85
TRIM47-204ENST00000587339 CDK16Q00536 496 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 CBLBQ13191 982 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 TEX44Q53QW1 395 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 TFAP2DQ7Z6R9 452 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 CHSY1Q86X52 802 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 PRMT1Q99873 361 aaKnown RBP20.35■□□□□ 0.85
TRIM47-204ENST00000587339 TCF25Q9BQ70 676 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 ALG13Q9NP73 1137 aaKnown RBP20.35■□□□□ 0.85
TRIM47-204ENST00000587339 CHMP2BQ9UQN3 213 aa20.35■□□□□ 0.85
TRIM47-204ENST00000587339 PHBP35232 272 aa20.34■□□□□ 0.85
TRIM47-204ENST00000587339 ELK3P41970 407 aa20.34■□□□□ 0.85
TRIM47-204ENST00000587339 ZBTB17Q13105 803 aa20.34■□□□□ 0.85
TRIM47-204ENST00000587339 TERF2Q15554 542 aa20.34■□□□□ 0.85
TRIM47-204ENST00000587339 C3orf62Q6ZUJ4 267 aa20.34■□□□□ 0.85
TRIM47-204ENST00000587339 PDCD7Q8N8D1 485 aaKnown RBP20.34■□□□□ 0.85
TRIM47-204ENST00000587339 RPRD1AQ96P16 312 aaPredicted RBP20.34■□□□□ 0.85
TRIM47-204ENST00000587339 AGAP3Q96P47 875 aa20.34■□□□□ 0.85
TRIM47-204ENST00000587339 STMN4Q9H169 189 aaPredicted RBP20.34■□□□□ 0.85
TRIM47-204ENST00000587339 ENTPD7Q9NQZ7 604 aa20.34■□□□□ 0.85
TRIM47-204ENST00000587339 EIF2B3Q9NR50 452 aaKnown RBP20.34■□□□□ 0.85
TRIM47-204ENST00000587339 TMEM248Q9NWD8 314 aa20.34■□□□□ 0.85
TRIM47-204ENST00000587339 TEX264Q9Y6I9 313 aa20.34■□□□□ 0.85
TRIM47-204ENST00000587339 CLUHO75153 1309 aa20.34■□□□□ 0.85
TRIM47-204ENST00000587339 C2orf78A6NCI8 922 aa20.33■□□□□ 0.85
TRIM47-204ENST00000587339 SSTR1P30872 391 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms