RNA–Protein interactions for RNA: ENST00000587127.1

UBE2O-204, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene UBE2O, Length 3,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-204ENST00000587127 PTPRHQ9HD43 1115 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 TCF7L2Q9NQB0 619 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 PCDHB12Q9Y5F1 795 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 A0A0J9YVX5 310 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 FARP2O94887 1054 aaPredicted RBP11.12□□□□□ -0.63
UBE2O-204ENST00000587127 VDRP11473 427 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 GOT1P17174 413 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 PTPN1P18031 435 aaKnown RBP11.12□□□□□ -0.63
UBE2O-204ENST00000587127 TTC30AQ86WT1 665 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 ZBTB8OSQ8IWT0 167 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 CCDC185Q8N715 623 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 CXorf38Q8TB03 319 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 ACMSDQ8TDX5 336 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 SNRNP27Q8WVK2 155 aaKnown RBP11.12□□□□□ -0.63
UBE2O-204ENST00000587127 CDKL2Q92772 493 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 CATSPER2Q96P56 530 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 NUF2Q9BZD4 464 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 RNF19AQ9NV58 838 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 HESX1Q9UBX0 185 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 PTPRFP10586 1907 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 IGKV6D-21A0A0A0MT36 114 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 CCDC78A2IDD5 438 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 GOLGA8TH3BQL2 631 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 PAPSS1O43252 624 aaPredicted RBP11.12□□□□□ -0.63
UBE2O-204ENST00000587127 CNTFP26441 200 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 PSMB4P28070 264 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 CLCN3P51790 818 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 BACE1P56817 501 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 LY6KQ17RY6 165 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 ZNF423Q2M1K9 1284 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 STXBP5Q5T5C0 1151 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 FAM219BQ5XKK7 198 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 KLHL23Q8NBE8 558 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 HPDLQ96IR7 371 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 AGAP3Q96P47 875 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 KCTD15Q96SI1 283 aaPredicted RBP11.12□□□□□ -0.63
UBE2O-204ENST00000587127 SEMA6AQ9H2E6 1030 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 ACAD9Q9H845 621 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 C6orf203Q9P0P8 240 aaPredicted RBP11.12□□□□□ -0.63
UBE2O-204ENST00000587127 TXNDC16Q9P2K2 825 aa11.12□□□□□ -0.63
UBE2O-204ENST00000587127 G3V2L1 256 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 MYL4P12829 197 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 ARSAP15289 507 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 GLDCP23378 1020 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 SURF1Q15526 300 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 LSM12Q3MHD2 195 aaKnown RBP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 FSCBQ5H9T9 825 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 RARS2Q5T160 578 aaKnown RBP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 NBPF12Q5TAG4 269 aaPredicted RBP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 NCBP2-AS2Q69YL0 99 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 KBTBD7Q8WVZ9 684 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 HTR3CQ8WXA8 447 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 CSPG4P5Q96PW8 444 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 ZNF670Q9BS34 389 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 GATA5Q9BWX5 397 aaPredicted RBP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 UNKQ9C0B0 810 aaKnown RBP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 NDUFA13Q9P0J0 144 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 STAG3L1P0CL83 205 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 MX2P20592 715 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 SAT1P21673 171 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 FGFR3P22607 806 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 PROZP22891 400 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 PPP2R5DQ14738 602 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 ACOT1Q86TX2 421 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 TICAM1Q8IUC6 712 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 QKIQ96PU8 341 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 CXCL16Q9H2A7 254 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 ZBTB42B2RXF5 422 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 ONECUT3O60422 494 aaPredicted RBP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 RNASEH2AO75792 299 aaKnown RBP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 CSPG5O95196 566 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 RPL10P27635 214 aaKnown RBP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 TMED1Q13445 227 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 NXNQ6DKJ4 435 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 BNC2Q6ZN30 1099 aaPredicted RBP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 TSHZ1Q6ZSZ6 1077 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 KYQ8NBH2 561 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 GAB3Q8WWW8 586 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 NDRG1Q92597 394 aaKnown RBP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 TMA16Q96EY4 203 aaKnown RBP11.11□□□□□ -0.63
UBE2O-204ENST00000587127 CPB2Q96IY4 423 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 TEX13BQ9BXU2 312 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 AP4E1Q9UPM8 1137 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 CDY2AQ9Y6F7 541 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 CDY1Q9Y6F8 540 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 SIP14410 1827 aa11.11□□□□□ -0.63
UBE2O-204ENST00000587127 COL11A1P12107 1806 aaPredicted RBP11.1□□□□□ -0.63
UBE2O-204ENST00000587127 FER1L6Q2WGJ9 1857 aa11.1□□□□□ -0.63
UBE2O-204ENST00000587127 TK2O00142 265 aa11.1□□□□□ -0.63
UBE2O-204ENST00000587127 MFSD11O43934 449 aa11.1□□□□□ -0.63
UBE2O-204ENST00000587127 P4HA1P13674 534 aa11.1□□□□□ -0.63
UBE2O-204ENST00000587127 EMP3P54852 163 aa11.1□□□□□ -0.63
UBE2O-204ENST00000587127 PIGGQ5H8A4 983 aa11.1□□□□□ -0.63
UBE2O-204ENST00000587127 FSTL4Q6MZW2 842 aa11.1□□□□□ -0.63
UBE2O-204ENST00000587127 DUS1LQ6P1R4 473 aaKnown RBP11.1□□□□□ -0.63
UBE2O-204ENST00000587127 POTEAQ6S8J7 498 aa11.1□□□□□ -0.63
UBE2O-204ENST00000587127 STRA8Q7Z7C7 330 aa11.1□□□□□ -0.63
UBE2O-204ENST00000587127 OR52K1Q8NGK4 314 aa11.1□□□□□ -0.63
UBE2O-204ENST00000587127 NPAS2Q99743 824 aa11.1□□□□□ -0.63
UBE2O-204ENST00000587127 FERMT1Q9BQL6 677 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms