RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 CHPFQ8IZ52 775 aa22.09■■□□□ 1.13
RETREG3-204ENST00000586796 MAML2Q8IZL2 1156 aaPredicted RBP22.09■■□□□ 1.13
RETREG3-204ENST00000586796 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.09■■□□□ 1.13
RETREG3-204ENST00000586796 CYB5D2Q8WUJ1 264 aa22.09■■□□□ 1.13
RETREG3-204ENST00000586796 EIF3CQ99613 913 aaKnown RBP22.09■■□□□ 1.13
RETREG3-204ENST00000586796 SNRNP25Q9BV90 132 aaKnown RBP22.09■■□□□ 1.13
RETREG3-204ENST00000586796 ZYG11BQ9C0D3 744 aa22.09■■□□□ 1.13
RETREG3-204ENST00000586796 DHX35Q9H5Z1 703 aaKnown RBP22.09■■□□□ 1.13
RETREG3-204ENST00000586796 ZWILCHQ9H900 591 aa22.09■■□□□ 1.13
RETREG3-204ENST00000586796 INTUQ9ULD6 942 aa22.09■■□□□ 1.13
RETREG3-204ENST00000586796 AP4E1Q9UPM8 1137 aa22.09■■□□□ 1.13
RETREG3-204ENST00000586796 STARD13Q9Y3M8 1113 aa22.09■■□□□ 1.13
RETREG3-204ENST00000586796 ZDBF2Q9HCK1 2354 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 IGLV3-10A0A075B6K4 115 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 SGK1O00141 431 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 LRIG2O94898 1065 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 MOCS3O95396 460 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 POLR2EP19388 210 aaKnown RBP22.08■■□□□ 1.13
RETREG3-204ENST00000586796 COL9A1P20849 921 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 MZF1P28698 734 aaPredicted RBP22.08■■□□□ 1.13
RETREG3-204ENST00000586796 AIF1P55008 147 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 DMC1Q14565 340 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 MESDQ14696 234 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 CA9Q16790 459 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 PITRM1Q5JRX3 1037 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 CXorf57Q6NSI4 855 aaKnown RBP22.08■■□□□ 1.13
RETREG3-204ENST00000586796 KIAA0907Q7Z7F0 614 aaPredicted RBP22.08■■□□□ 1.13
RETREG3-204ENST00000586796 CPNE8Q86YQ8 564 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 TMEM139Q8IV31 216 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 APCDD1Q8J025 514 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 TBC1D31Q96DN5 1066 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 LMLNQ96KR4 655 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 PRRX2Q99811 253 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 NCAPGQ9BPX3 1015 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 LUC7LQ9NQ29 371 aaKnown RBP22.08■■□□□ 1.13
RETREG3-204ENST00000586796 CACNA2D2Q9NY47 1150 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 INTS6Q9UL03 887 aaKnown RBP22.08■■□□□ 1.13
RETREG3-204ENST00000586796 MMP17Q9ULZ9 603 aa22.08■■□□□ 1.13
RETREG3-204ENST00000586796 ATG2BQ96BY7 2078 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 TIMM44O43615 452 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 RHOCP08134 193 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 CHRM1P11229 460 aaPredicted RBP22.07■■□□□ 1.12
RETREG3-204ENST00000586796 OR1E1P30953 314 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 PCK1P35558 622 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 GJC1P36383 396 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 NOP2P46087 812 aaKnown RBP22.07■■□□□ 1.12
RETREG3-204ENST00000586796 NRG1Q02297 640 aaPredicted RBP22.07■■□□□ 1.12
RETREG3-204ENST00000586796 EIF4HQ15056 248 aaKnown RBP22.07■■□□□ 1.12
RETREG3-204ENST00000586796 SMTNL2Q2TAL5 461 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 KCNT1Q5JUK3 1230 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 EOGTQ5NDL2 527 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 ARTNQ5T4W7 220 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 RNF219Q5W0B1 726 aaPredicted RBP22.07■■□□□ 1.12
RETREG3-204ENST00000586796 SDE2Q6IQ49 451 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 SYT13Q7L8C5 426 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 TRMT11Q7Z4G4 463 aaKnown RBP22.07■■□□□ 1.12
RETREG3-204ENST00000586796 RHOT2Q8IXI1 618 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 NIPA2Q8N8Q9 360 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 ACRBPQ8NEB7 543 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 OR52K2Q8NGK3 314 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 KCNV2Q8TDN2 545 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 RFFLQ8WZ73 363 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 HSPH1Q92598 858 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 HHIPQ96QV1 700 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 MUC3BQ9H195 1237 aa22.07■■□□□ 1.12
RETREG3-204ENST00000586796 PPARGC1AQ9UBK2 798 aaKnown RBP22.07■■□□□ 1.12
RETREG3-204ENST00000586796 WASH3PC4AMC7 463 aa22.06■■□□□ 1.12
RETREG3-204ENST00000586796 ADAM23O75077 832 aa22.06■■□□□ 1.12
RETREG3-204ENST00000586796 PROSCO94903 275 aa22.06■■□□□ 1.12
RETREG3-204ENST00000586796 ATP5BP06576 529 aaKnown RBP22.06■■□□□ 1.12
RETREG3-204ENST00000586796 IL1R2P27930 398 aa22.06■■□□□ 1.12
RETREG3-204ENST00000586796 NTSR1P30989 418 aa22.06■■□□□ 1.12
RETREG3-204ENST00000586796 L1CAMP32004 1257 aa22.06■■□□□ 1.12
RETREG3-204ENST00000586796 MANEALQ5VSG8 457 aa22.06■■□□□ 1.12
RETREG3-204ENST00000586796 MAMSTRQ6ZN01 415 aa22.06■■□□□ 1.12
RETREG3-204ENST00000586796 CYP4V2Q6ZWL3 525 aaPredicted RBP22.06■■□□□ 1.12
RETREG3-204ENST00000586796 EPAS1Q99814 870 aa22.06■■□□□ 1.12
RETREG3-204ENST00000586796 PRMT8Q9NR22 394 aaPredicted RBP22.06■■□□□ 1.12
RETREG3-204ENST00000586796 THAP10Q9P2Z0 257 aaPredicted RBP22.06■■□□□ 1.12
RETREG3-204ENST00000586796 PLA2G4CQ9UP65 541 aa22.06■■□□□ 1.12
RETREG3-204ENST00000586796 SP9P0CG40 484 aa22.05■■□□□ 1.12
RETREG3-204ENST00000586796 HOXB2P14652 356 aa22.05■■□□□ 1.12
RETREG3-204ENST00000586796 HNRNPLP14866 589 aaKnown RBP eCLIP22.05■■□□□ 1.12
RETREG3-204ENST00000586796 EPHB2P29323 1055 aa22.05■■□□□ 1.12
RETREG3-204ENST00000586796 CTSOP43234 321 aaPredicted RBP22.05■■□□□ 1.12
RETREG3-204ENST00000586796 PXNP49023 591 aaPredicted RBP22.05■■□□□ 1.12
RETREG3-204ENST00000586796 MRE11P49959 708 aa22.05■■□□□ 1.12
RETREG3-204ENST00000586796 OXCT1P55809 520 aa22.05■■□□□ 1.12
RETREG3-204ENST00000586796 TCF15Q12870 199 aa22.05■■□□□ 1.12
RETREG3-204ENST00000586796 ZNF234Q14588 700 aa22.05■■□□□ 1.12
RETREG3-204ENST00000586796 PLEKHG6Q3KR16 790 aa22.05■■□□□ 1.12
RETREG3-204ENST00000586796 HSF5Q4G112 596 aaPredicted RBP22.05■■□□□ 1.12
RETREG3-204ENST00000586796 FNDC3BQ53EP0 1204 aaKnown RBP22.05■■□□□ 1.12
RETREG3-204ENST00000586796 PPP6R3Q5H9R7 873 aaPredicted RBP22.05■■□□□ 1.12
RETREG3-204ENST00000586796 C6orf118Q5T5N4 469 aa22.05■■□□□ 1.12
RETREG3-204ENST00000586796 HEATR6Q6AI08 1181 aaKnown RBP22.05■■□□□ 1.12
RETREG3-204ENST00000586796 TXNRD3NBQ6F5E7 133 aa22.05■■□□□ 1.12
RETREG3-204ENST00000586796 KCTD15Q96SI1 283 aaPredicted RBP22.05■■□□□ 1.12
RETREG3-204ENST00000586796 DNAI1Q9UI46 699 aa22.05■■□□□ 1.12
RETREG3-204ENST00000586796 FBXO4Q9UKT5 387 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms