RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 RAP1GAP2Q684P5 730 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 NUGGCQ68CJ6 796 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 DENND1BQ6P3S1 775 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 TAC4Q86UU9 113 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 CIR1Q86X95 450 aaPredicted RBP12.04□□□□□ -0.48
LIG3-207ENST00000586119 LGI2Q8N0V4 545 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 PPM1KQ8N3J5 372 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 ENGASEQ8NFI3 743 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 IRGQQ8WZA9 623 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 PTPRN2Q92932 1015 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 AZIN2Q96A70 460 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 KREMEN1Q96MU8 473 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 TSG101Q99816 390 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 TJP2Q9UDY2 1190 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 CYTH4Q9UIA0 394 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 NCKAP1Q9Y2A7 1128 aa12.04□□□□□ -0.48
LIG3-207ENST00000586119 IGSF10Q6WRI0 2623 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 GOLGA6L4A6NEF3 574 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 IRAK2O43187 625 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 MZF1P28698 734 aaPredicted RBP12.03□□□□□ -0.48
LIG3-207ENST00000586119 GPD2P43304 727 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 PSMD8P48556 350 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 C21orf59P57076 290 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 ST8SIA6P61647 398 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 PPP2CBP62714 309 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 RACK1P63244 317 aaKnown RBP12.03□□□□□ -0.48
LIG3-207ENST00000586119 PPP2CAP67775 309 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 TAF5Q15542 800 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 TTC31Q49AM3 519 aaPredicted RBP12.03□□□□□ -0.48
LIG3-207ENST00000586119 COBLL1Q53SF7 1204 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 ZC3H12AQ5D1E8 599 aaKnown RBP12.03□□□□□ -0.48
LIG3-207ENST00000586119 USP30Q70CQ3 517 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 EID2Q8N6I1 236 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 HJURPQ8NCD3 748 aaPredicted RBP12.03□□□□□ -0.48
LIG3-207ENST00000586119 SPATA20Q8TB22 786 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 GOLGA1Q92805 767 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 FAM149B1Q96BN6 582 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 HSFY1Q96LI6 401 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 NT5C1BQ96P26 610 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 ELF4Q99607 663 aaPredicted RBP12.03□□□□□ -0.48
LIG3-207ENST00000586119 OMDQ99983 421 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 ACE2Q9BYF1 805 aaPredicted RBP12.03□□□□□ -0.48
LIG3-207ENST00000586119 FBRSQ9HAH7 460 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 ST7Q9NRC1 585 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 AASDHPPTQ9NRN7 309 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 FTSJ1Q9UET6 329 aa12.03□□□□□ -0.48
LIG3-207ENST00000586119 ENC1O14682 589 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 LUC7L3O95232 432 aaKnown RBP12.02□□□□□ -0.49
LIG3-207ENST00000586119 ZIC2O95409 532 aaPredicted RBP12.02□□□□□ -0.49
LIG3-207ENST00000586119 LDOC1O95751 146 aaPredicted RBP12.02□□□□□ -0.49
LIG3-207ENST00000586119 TACR2P21452 398 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 BMP6P22004 513 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 ITPKBP27987 946 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 KLHL10Q6JEL2 608 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.02□□□□□ -0.49
LIG3-207ENST00000586119 SPATS2Q86XZ4 545 aaKnown RBP12.02□□□□□ -0.49
LIG3-207ENST00000586119 GALNT15Q8N3T1 639 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 EHBP1Q8NDI1 1231 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 OR52K2Q8NGK3 314 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 OR14C36Q8NHC7 312 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 SAP25Q8TEE9 199 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 CNDP2Q96KP4 475 aaKnown RBP12.02□□□□□ -0.49
LIG3-207ENST00000586119 GSDMAQ96QA5 445 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 ANP32EQ9BTT0 268 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 RMND1Q9NWS8 449 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 DKK4Q9UBT3 224 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 MAN1B1Q9UKM7 699 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 TLR6Q9Y2C9 796 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 CA5BQ9Y2D0 317 aa12.02□□□□□ -0.49
LIG3-207ENST00000586119 SMG1Q96Q15 3661 aaKnown RBP12.02□□□□□ -0.49
LIG3-207ENST00000586119 TARSL2A2RTX5 802 aaKnown RBP12.01□□□□□ -0.49
LIG3-207ENST00000586119 PAPSS1O43252 624 aaPredicted RBP12.01□□□□□ -0.49
LIG3-207ENST00000586119 TLX3O43711 291 aaPredicted RBP12.01□□□□□ -0.49
LIG3-207ENST00000586119 RNASEH1O60930 286 aaKnown RBP12.01□□□□□ -0.49
LIG3-207ENST00000586119 ASLP04424 464 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 ITGAVP06756 1048 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 PDGFRAP16234 1089 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 CD38P28907 300 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 MAT2AP31153 395 aaKnown RBP12.01□□□□□ -0.49
LIG3-207ENST00000586119 DRD3P35462 400 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 RPL34P49207 117 aaKnown RBP12.01□□□□□ -0.49
LIG3-207ENST00000586119 IRAK1P51617 712 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 ADPRHP54922 357 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 ECT2LQ008S8 904 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 CDH18Q13634 790 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 POM121L1PQ3SYA9 428 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 CCDC40Q4G0X9 1142 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 GJB7Q6PEY0 223 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 PDCD7Q8N8D1 485 aaKnown RBP12.01□□□□□ -0.49
LIG3-207ENST00000586119 OR2T34Q8NGX1 318 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 SMARCE1Q969G3 411 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 SERAC1Q96JX3 654 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 METTL14Q9HCE5 456 aaKnown RBP12.01□□□□□ -0.49
LIG3-207ENST00000586119 SCUBE2Q9NQ36 999 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 ARHGAP20Q9P2F6 1191 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 ADAMTS1Q9UHI8 967 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 SARDHQ9UL12 918 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 SCML1Q9UN30 329 aa12.01□□□□□ -0.49
LIG3-207ENST00000586119 CEP83Q9Y592 693 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms