RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 PDGFRLQ15198 375 aa17.42■□□□□ 0.38
HMG20B-215ENST00000585741 ANO4Q32M45 955 aa17.42■□□□□ 0.38
HMG20B-215ENST00000585741 FAM133BQ5BKY9 247 aaKnown RBP17.42■□□□□ 0.38
HMG20B-215ENST00000585741 DCAF12L1Q5VU92 463 aa17.42■□□□□ 0.38
HMG20B-215ENST00000585741 AADACL2Q6P093 401 aa17.42■□□□□ 0.38
HMG20B-215ENST00000585741 POTEHQ6S545 545 aa17.42■□□□□ 0.38
HMG20B-215ENST00000585741 PARM1Q6UWI2 310 aa17.42■□□□□ 0.38
HMG20B-215ENST00000585741 TMCO3Q6UWJ1 677 aa17.42■□□□□ 0.38
HMG20B-215ENST00000585741 ST13P5Q8NFI4 369 aaPredicted RBP17.42■□□□□ 0.38
HMG20B-215ENST00000585741 FAM71BQ8TC56 605 aa17.42■□□□□ 0.38
HMG20B-215ENST00000585741 COG1Q8WTW3 980 aa17.42■□□□□ 0.38
HMG20B-215ENST00000585741 PRMT1Q99873 361 aaKnown RBP17.42■□□□□ 0.38
HMG20B-215ENST00000585741 TRMT61BQ9BVS5 477 aaKnown RBP17.42■□□□□ 0.38
HMG20B-215ENST00000585741 RNF14Q9UBS8 474 aa17.42■□□□□ 0.38
HMG20B-215ENST00000585741 EFR3BQ9Y2G0 817 aa17.42■□□□□ 0.38
HMG20B-215ENST00000585741 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.41■□□□□ 0.38
HMG20B-215ENST00000585741 GOLGA6L10A0A0M3HER8 536 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 C3orf70A6NLC5 250 aaPredicted RBP17.41■□□□□ 0.38
HMG20B-215ENST00000585741 GREM1O60565 184 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 CST8O60676 142 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 ADH1CP00326 375 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 RHOQP17081 205 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 ERCC2P18074 760 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 PTPN7P35236 360 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 CDH4P55283 916 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 CKAP4Q07065 602 aaKnown RBP17.41■□□□□ 0.38
HMG20B-215ENST00000585741 SEMA3BQ13214 749 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 ZNF177Q13360 481 aaPredicted RBP17.41■□□□□ 0.38
HMG20B-215ENST00000585741 GRM2Q14416 872 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 VITQ6UXI7 678 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 SLC13A5Q86YT5 568 aaPredicted RBP17.41■□□□□ 0.38
HMG20B-215ENST00000585741 ATP2A3Q93084 1043 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 IRF2BPLQ9H1B7 796 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 RETREG1Q9H6L5 497 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 SPHK2Q9NRA0 654 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 MPP6Q9NZW5 540 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 NUMBLQ9Y6R0 609 aa17.41■□□□□ 0.38
HMG20B-215ENST00000585741 A0A1B0GVM2 712 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 TCAF2A6NFQ2 919 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 DRGXA6NNA5 263 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 H0Y626 953 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 ZNF185O15231 689 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 CLDN11O75508 207 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 FCARP24071 287 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 GDI1P31150 447 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 AMPD2Q01433 879 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 CDH18Q13634 790 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 MANEALQ5VSG8 457 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 CWF19L1Q69YN2 538 aaKnown RBP17.4■□□□□ 0.38
HMG20B-215ENST00000585741 ASTLQ6HA08 431 aaPredicted RBP17.4■□□□□ 0.38
HMG20B-215ENST00000585741 BZW1Q7L1Q6 419 aaKnown RBP17.4■□□□□ 0.38
HMG20B-215ENST00000585741 ASCL5Q7RTU5 278 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 TFAP2DQ7Z6R9 452 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 ADAT2Q7Z6V5 191 aaKnown RBP17.4■□□□□ 0.38
HMG20B-215ENST00000585741 ZNF354CQ86Y25 554 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 FAM217AQ8IXS0 508 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 CFAP52Q8N1V2 620 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 CARNMT1Q8N4J0 409 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 CPA6Q8N4T0 437 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 LZTR1Q8N653 840 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 ZNF557Q8N988 423 aaPredicted RBP17.4■□□□□ 0.38
HMG20B-215ENST00000585741 TTC13Q8NBP0 860 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 PCDH19Q8TAB3 1148 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 ACTRT1Q8TDG2 376 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 TSC1Q92574 1164 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 P3H4Q92791 437 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 FGF14Q92915 247 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 IRF7Q92985 503 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 BHMTQ93088 406 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 IGSF8Q969P0 613 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 NXPE3Q969Y0 559 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 FAF2Q96CS3 445 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 RSPRY1Q96DX4 576 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 BBS2Q9BXC9 721 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 LINC00597Q9H2U6 94 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 BRD9Q9H8M2 597 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 ARHGEF4Q9NR80 690 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 CDC23Q9UJX2 597 aa17.4■□□□□ 0.38
HMG20B-215ENST00000585741 NUP210Q8TEM1 1887 aaPredicted RBP17.39■□□□□ 0.38
HMG20B-215ENST00000585741 IGLV3-10A0A075B6K4 115 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 NEDD8-MDP1E9PL57 170 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 FANCGO15287 622 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 TGM2P21980 687 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 OR1E1P30953 314 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 HOXC13P31276 330 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 NBL1P41271 181 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 MAPKAPK2P49137 400 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 RPS24P62847 133 aaKnown RBP17.39■□□□□ 0.37
HMG20B-215ENST00000585741 GAD2Q05329 585 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 HTR4Q13639 388 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 DPYSQ14117 519 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 WHAMMP3Q1A5X7 153 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 C6orf118Q5T5N4 469 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 C1orf228Q6PIY5 440 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 BBS12Q6ZW61 710 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 CHST9Q7L1S5 443 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 CIR1Q86X95 450 aaPredicted RBP17.39■□□□□ 0.37
HMG20B-215ENST00000585741 MFN1Q8IWA4 741 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 RASGEF1CQ8N431 466 aa17.39■□□□□ 0.37
HMG20B-215ENST00000585741 RTL3Q8N8U3 475 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms