RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CSH2P0DML3 217 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 ETS1P14921 441 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 RBL1P28749 1068 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 FDFT1P37268 417 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 MAGEA4P43358 317 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 MAGEA6P43360 314 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 PPP3CCP48454 512 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 SARNPP82979 210 aaKnown RBP10.7□□□□□ -0.7
LIG3-203ENST00000585370 CDK16Q00536 496 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 SLC29A2Q14542 456 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 IER5LQ5T953 404 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 EMC10Q5UCC4 262 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 RNF19BQ6ZMZ0 732 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 TAS1R1Q7RTX1 841 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 PDIK1LQ8N165 341 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 PYROXD2Q8N2H3 581 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 ARFGAP2Q8N6H7 521 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 ATP6V0D2Q8N8Y2 350 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 MRPL43Q8N983 215 aaKnown RBP10.7□□□□□ -0.7
LIG3-203ENST00000585370 NAT8LQ8N9F0 302 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 GLIS1Q8NBF1 620 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 MCUQ8NE86 351 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 ZNF461Q8TAF7 563 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 FAM76AQ8TAV0 307 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 HTR3CQ8WXA8 447 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 PRCCQ92733 491 aaPredicted RBP10.7□□□□□ -0.7
LIG3-203ENST00000585370 PBXIP1Q96AQ6 731 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 ATP6V1G3Q96LB4 118 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 PGLYRP2Q96PD5 576 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 APOL5Q9BWW9 433 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 RETREG1Q9H6L5 497 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 CATSPERBQ9H7T0 1116 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 VPS18Q9P253 973 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 CDY1Q9Y6F8 540 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 MYO10Q9HD67 2058 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 C2orf71A6NGG8 1288 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 SLC38A8A6NNN8 435 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 KCNU1A8MYU2 1149 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 OPHN1O60890 802 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 APOEP02649 317 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 URODP06132 367 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 IVLP07476 585 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 ZDHHC11BP0C7U3 371 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 ERCC2P18074 760 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 ATP5DP30049 168 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 OR1D2P34982 312 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 GDF10P55107 478 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 MLLT6P55198 1093 aaPredicted RBP10.69□□□□□ -0.7
LIG3-203ENST00000585370 GBE1Q04446 702 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 RING1Q06587 406 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 ZNF844Q08AG5 666 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 IFRD2Q12894 506 aaPredicted RBP10.69□□□□□ -0.7
LIG3-203ENST00000585370 SLC10A2Q12908 348 aaPredicted RBP10.69□□□□□ -0.7
LIG3-203ENST00000585370 DUSP4Q13115 394 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 RAB33AQ14088 237 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 STAT4Q14765 748 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 PRKD1Q15139 912 aaPredicted RBP10.69□□□□□ -0.7
LIG3-203ENST00000585370 TRIP4Q15650 581 aaPredicted RBP10.69□□□□□ -0.7
LIG3-203ENST00000585370 HIF1AQ16665 826 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 KRT71Q3SY84 523 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 SNX30Q5VWJ9 437 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 PRSS55Q6UWB4 352 aaPredicted RBP10.69□□□□□ -0.7
LIG3-203ENST00000585370 RSPO2Q6UXX9 243 aaPredicted RBP10.69□□□□□ -0.7
LIG3-203ENST00000585370 TMC7Q7Z402 723 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 TMEM173Q86WV6 379 aaPredicted RBP10.69□□□□□ -0.7
LIG3-203ENST00000585370 CNPY4Q8N129 248 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 ADAM32Q8TC27 787 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 BCL7CQ8WUZ0 217 aaPredicted RBP10.69□□□□□ -0.7
LIG3-203ENST00000585370 CPT1BQ92523 772 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 EXOC4Q96A65 974 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 PGM2Q96G03 612 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 SLC39A13Q96H72 371 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 SERPINB12Q96P63 405 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 VAT1Q99536 393 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 SEPT5Q99719 369 aaPredicted RBP10.69□□□□□ -0.7
LIG3-203ENST00000585370 EPB41L4BQ9H329 900 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 CDC42EP4Q9H3Q1 356 aaKnown RBP10.69□□□□□ -0.7
LIG3-203ENST00000585370 NMUR1Q9HB89 426 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.69□□□□□ -0.7
LIG3-203ENST00000585370 PSD3Q9NYI0 1048 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 CDH22Q9UJ99 828 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 ADAM21Q9UKJ8 722 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 SLC27A5Q9Y2P5 690 aa10.69□□□□□ -0.7
LIG3-203ENST00000585370 PATJQ8NI35 1801 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 A0A087WUV0 522 aaPredicted RBP10.68□□□□□ -0.7
LIG3-203ENST00000585370 A0A0A0MRY4 1105 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 WASH4PA8MWX3 477 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 E7ESA3 106 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 RASGRF2O14827 1237 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 CLASP2O75122 1294 aaKnown RBP10.68□□□□□ -0.7
LIG3-203ENST00000585370 SPAG6O75602 509 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 LRIG2O94898 1065 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 SRGAP2BP0DMP2 458 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 HOXB8P17481 243 aaPredicted RBP10.68□□□□□ -0.7
LIG3-203ENST00000585370 TPSB2P20231 275 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 EPHB2P29323 1055 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 HOXC13P31276 330 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 ELF1P32519 619 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 PHBP35232 272 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 CHKAP35790 457 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms