RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 MTF2Q9Y483 593 aaPredicted RBP10.55□□□□□ -0.72
RFFL-212ENST00000584655 KCTD3Q9Y597 815 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 LCTP09848 1927 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 SPTBN5Q9NRC6 3674 aaKnown RBP10.55□□□□□ -0.72
RFFL-212ENST00000584655 UBA6A0AVT1 1052 aaPredicted RBP10.55□□□□□ -0.72
RFFL-212ENST00000584655 MYL4P12829 197 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 SELPP16109 830 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 TYK2P29597 1187 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 FOXN2P32314 431 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 PHBP35232 272 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 CCR10P46092 362 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 CYP4F8P98187 520 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 ICE2Q659A1 982 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 FUT10Q6P4F1 479 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 CRYBG2Q8N1P7 616 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 AGGF1Q8N302 714 aaeCLIP10.55□□□□□ -0.72
RFFL-212ENST00000584655 GIMAP7Q8NHV1 300 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 BCL7CQ8WUZ0 217 aaPredicted RBP10.55□□□□□ -0.72
RFFL-212ENST00000584655 MYEOVQ96EZ4 313 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 FERMT1Q9BQL6 677 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 FTHL17Q9BXU8 183 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 SLC2A6Q9UGQ3 507 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 CIDEBQ9UHD4 219 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 GIT1Q9Y2X7 761 aa10.55□□□□□ -0.72
RFFL-212ENST00000584655 PSME4Q14997 1843 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 A0A0D9SEW6 157 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 GOLGA8QA0A0J9YX86 632 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 CFAP69A5D8W1 941 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 GOLGA8OA6NCC3 632 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 GRXCR1A8MXD5 290 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 GOLGA8NF8WBI6 632 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 ARVCFO00192 962 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 CES2O00748 559 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 RPSAP08865 295 aaKnown RBP10.54□□□□□ -0.72
RFFL-212ENST00000584655 PRSS56P0CW18 603 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 KCNE1P15382 129 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 MAGEA9P43362 315 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 TWF1Q12792 350 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 HABP4Q5JVS0 413 aaKnown RBP10.54□□□□□ -0.72
RFFL-212ENST00000584655 KDM7AQ6ZMT4 941 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 CDHR3Q6ZTQ4 885 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 MAB21L3Q8N8X9 362 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 SEC14L1Q92503 715 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 KIAA1257Q9ULG3 409 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 REV3LO60673 3130 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 LOC100653049A0A140TA62 436 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 KRT34O76011 436 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 HAPLN1P10915 354 aaPredicted RBP10.54□□□□□ -0.72
RFFL-212ENST00000584655 TGM2P21980 687 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 ACADSBP45954 432 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 FOXD4Q12950 439 aaPredicted RBP10.54□□□□□ -0.72
RFFL-212ENST00000584655 PEX6Q13608 980 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 LHX8Q68G74 356 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 NXNQ6DKJ4 435 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 UNC5AQ6ZN44 842 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 TRMT10CQ7L0Y3 403 aaKnown RBP10.54□□□□□ -0.72
RFFL-212ENST00000584655 TADA2BQ86TJ2 420 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 DENND6AQ8IWF6 608 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 CARNMT1Q8N4J0 409 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 PXYLP1Q8TE99 480 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 SEPT8Q92599 483 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 PSMG2Q969U7 264 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 STAMBPL1Q96FJ0 436 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 FAM96AQ9H5X1 160 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 USP29Q9HBJ7 922 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 MAN1C1Q9NR34 630 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 CHST12Q9NRB3 414 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 NCF1BA6NI72 391 aaPredicted RBP10.54□□□□□ -0.72
RFFL-212ENST00000584655 NCF1CA8MVU1 366 aaPredicted RBP10.54□□□□□ -0.72
RFFL-212ENST00000584655 NCF1P14598 390 aaPredicted RBP10.54□□□□□ -0.72
RFFL-212ENST00000584655 TARSP26639 723 aaKnown RBP10.54□□□□□ -0.72
RFFL-212ENST00000584655 YWHAQP27348 245 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 CD86P42081 329 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 EIF3BP55884 814 aaKnown RBP10.54□□□□□ -0.72
RFFL-212ENST00000584655 TBX4P57082 545 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 CNGA3Q16281 694 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 STXBP5Q5T5C0 1151 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 ARMC12Q5T9G4 340 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 RASIP1Q5U651 963 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 KIRREL3Q8IZU9 778 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 UTP6Q9NYH9 597 aaKnown RBP10.54□□□□□ -0.72
RFFL-212ENST00000584655 PAK5Q9P286 719 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 CDH9Q9ULB4 789 aa10.54□□□□□ -0.72
RFFL-212ENST00000584655 CBX6O95503 412 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 MYOGP15173 224 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 LBX1P52954 281 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 WDR4P57081 412 aaKnown RBP10.53□□□□□ -0.72
RFFL-212ENST00000584655 GEMIN4P57678 1058 aaKnown RBP10.53□□□□□ -0.72
RFFL-212ENST00000584655 DSC2Q02487 901 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 STILQ15468 1287 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 CYP1B1Q16678 543 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 SLC45A4Q5BKX6 768 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 VSTM1Q6UX27 236 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 ISLR2Q6UXK2 745 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 CDKL3Q8IVW4 592 aaPredicted RBP10.53□□□□□ -0.72
RFFL-212ENST00000584655 TOP6BLQ8N6T0 577 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 CCDC197Q8NCU1 140 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 ACVR1CQ8NER5 493 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 KCNV2Q8TDN2 545 aa10.53□□□□□ -0.72
RFFL-212ENST00000584655 MUC3BQ9H195 1237 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms