RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 CDO1Q16878 200 aa28■■■□□ 2.07
SMARCD2-210ENST00000584400 CCDC14Q49A88 953 aa28■■■□□ 2.07
SMARCD2-210ENST00000584400 MCOLN2Q8IZK6 566 aa28■■■□□ 2.07
SMARCD2-210ENST00000584400 OR2T3Q8NH03 318 aa28■■■□□ 2.07
SMARCD2-210ENST00000584400 JOSD2Q8TAC2 188 aa28■■■□□ 2.07
SMARCD2-210ENST00000584400 SYN2Q92777 582 aaPredicted RBP28■■■□□ 2.07
SMARCD2-210ENST00000584400 ERLEC1Q96DZ1 483 aa28■■■□□ 2.07
SMARCD2-210ENST00000584400 SIPA1Q96FS4 1042 aa28■■■□□ 2.07
SMARCD2-210ENST00000584400 INTS6Q9UL03 887 aaKnown RBP28■■■□□ 2.07
SMARCD2-210ENST00000584400 PRR5-ARHGAP8B1AHC4 643 aa27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 CBFA2T2O43439 604 aa27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 ACADMP11310 421 aa27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 GZMAP12544 262 aa27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 BCKDHBP21953 392 aa27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 RFC1P35251 1148 aaPredicted RBP27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 DPP6P42658 865 aa27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 PLK1P53350 603 aa27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 ATXN1P54253 815 aaKnown RBP27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 ARHGAP8P85298 464 aa27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 ECT2LQ008S8 904 aa27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 NFKBIBQ15653 356 aa27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 DCUN1D2Q6PH85 259 aa27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 CIR1Q86X95 450 aaPredicted RBP27.99■■■□□ 2.07
SMARCD2-210ENST00000584400 VPS13AQ96RL7 3174 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 HLA-EP13747 358 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 SDHBP21912 280 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 TGM1P22735 817 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 MPLP40238 635 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 ZBED6P86452 979 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 CREB5Q02930 508 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 C15orf59Q2T9L4 293 aaPredicted RBP27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 WDR59Q6PJI9 974 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 C14orf80Q86SX3 495 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 VPS36Q86VN1 386 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 CENPIQ92674 756 aaPredicted RBP27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 MKRN2Q9H000 416 aaKnown RBP27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 ANLNQ9NQW6 1124 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 VPS45Q9NRW7 570 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 PARVAQ9NVD7 372 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 CYP8B1Q9UNU6 501 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 ERVW-1Q9UQF0 538 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 TBC1D30Q9Y2I9 924 aa27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 LUC7L2Q9Y383 392 aaKnown RBP27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.98■■■□□ 2.07
SMARCD2-210ENST00000584400 DMDP11532 3685 aa27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 IGHV1OR15-9A0A0B4J2B8 117 aa27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 DRGXA6NNA5 263 aa27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 ZNF806P0C7X5 589 aa27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 OXTRP30559 389 aa27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 GGCXP38435 758 aa27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 DHPSP49366 369 aaPredicted RBP27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 RPL6Q02878 288 aaKnown RBP27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 ZNF571Q7Z3V5 609 aaPredicted RBP27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 FAM172AQ8WUF8 416 aa27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 PARD6AQ9NPB6 346 aa27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 ITM2CQ9NQX7 267 aa27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 MBD1Q9UIS9 605 aaPredicted RBP27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 CAPN11Q9UMQ6 739 aa27.97■■■□□ 2.07
SMARCD2-210ENST00000584400 ITIH6Q6UXX5 1313 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 BCLAF3A2AJT9 711 aaKnown RBP27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 TMCO5BA8MYB1 307 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 E9PAM4 449 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 NDUFS2O75306 463 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 GJB6O95452 261 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 RRM1P23921 792 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 ADRA1BP35368 520 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 ZNF143P52747 638 aaPredicted RBP27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 COPAP53621 1224 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 ZBTB16Q05516 673 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 ARID5BQ14865 1188 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 TDRD12Q587J7 1177 aaKnown RBP27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 C6orf118Q5T5N4 469 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 CXorf57Q6NSI4 855 aaKnown RBP27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 PRR23CQ6ZRP0 262 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 CYP2U1Q7Z449 544 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 SETD3Q86TU7 594 aaPredicted RBP27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 APCDD1Q8J025 514 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 C12orf50Q8NA57 414 aaPredicted RBP27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 TRIM11Q96F44 468 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 MCEEQ96PE7 176 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 SLC6A17Q9H1V8 727 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 PRSS16Q9NQE7 514 aa27.96■■■□□ 2.07
SMARCD2-210ENST00000584400 IGLV3-10A0A075B6K4 115 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 TCRBV5S1A1TA0A578 114 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 TARSL2A2RTX5 802 aaKnown RBP27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 I6L893 689 aaPredicted RBP27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 SRGAP2O75044 1071 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 HNRNPA1L2Q32P51 320 aaKnown RBP27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 TMEFF1Q8IYR6 380 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 ZNF683Q8IZ20 524 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 FRMD1Q8N878 549 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 CPLX3Q8WVH0 158 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 MRGPRX3Q96LB0 322 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 FEM1AQ9BSK4 669 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 ZYG11BQ9C0D3 744 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 XPO4Q9C0E2 1151 aaKnown RBP27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 MUC3BQ9H195 1237 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 RETREG1Q9H6L5 497 aa27.95■■■□□ 2.06
SMARCD2-210ENST00000584400 USP36Q9P275 1121 aaKnown RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms