RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 SOWAHCQ53LP3 525 aaPredicted RBP8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 NKAPLQ5M9Q1 402 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 DAB2IPQ5VWQ8 1189 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 TDRD10Q5VZ19 366 aaKnown RBP8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 LYSMD4Q5XG99 296 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 FBXW10Q5XX13 1052 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 PAOXQ6QHF9 649 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 C19orf48Q6RUI8 117 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 SLCO6A1Q86UG4 719 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 FUKQ8N0W3 1084 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 SHISA5Q8N114 240 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 MINDY1Q8N5J2 469 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 PDILTQ8N807 584 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 TERB1Q8NA31 727 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 B3GALNT2Q8NCR0 500 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 PSMG3-AS1Q96PY0 264 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 TWNKQ96RR1 684 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 CGRRF1Q99675 332 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 DPH2Q9BQC3 489 aaPredicted RBP8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 NMUR1Q9HB89 426 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 PANK4Q9NVE7 773 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 TRPM5Q9NZQ8 1165 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 SEL1LQ9UBV2 794 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 KLHL3Q9UH77 587 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 NUDT5Q9UKK9 219 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 CLEC4EQ9ULY5 219 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 KALRNO60229 2985 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 ASXL3Q9C0F0 2248 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 FAM92AA1XBS5 289 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 VPS37CA5D8V6 355 aaPredicted RBP8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 CLIC2O15247 247 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 CBFA2T3O75081 653 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 TACC1O75410 805 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 CISD3P0C7P0 127 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 MBL2P11226 248 aaPredicted RBP8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 CCDC130P13994 396 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 GAP43P17677 238 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 EIF2DP41214 584 aaKnown RBP8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 GRIA2P42262 883 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 SLC5A3P53794 718 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 AMPD2Q01433 879 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 CYP24A1Q07973 514 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 CUL4AQ13619 759 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 POSTNQ15063 836 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 C1orf220Q5T0J3 134 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 PRAMEF13Q5VWM6 474 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 RRAGBQ5VZM2 374 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 LARP1BQ659C4 914 aaKnown RBP8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 SLC6A19Q695T7 634 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 SCARA5Q6ZMJ2 495 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 C4orf50Q6ZRC1 276 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 LPCAT2Q7L5N7 544 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 DPH6Q7L8W6 267 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 PROSER1Q86XN7 944 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 WDR49Q8IV35 697 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 ZNF513Q8N8E2 541 aaPredicted RBP8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 RBBP8NLQ8NC74 664 aaPredicted RBP8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 FAM13CQ8NE31 585 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 RASSF8Q8NHQ8 419 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 SCFD1Q8WVM8 642 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 HSPA12BQ96MM6 686 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 GTPBP2Q9BX10 602 aaKnown RBP8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 SRRTQ9BXP5 876 aaKnown RBP8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 AGPAT3Q9NRZ7 376 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 SMC3Q9UQE7 1217 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 MTMR6Q9Y217 621 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 PTPRQQ9UMZ3 2332 aa8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 URB1O60287 2271 aaKnown RBP8.32□□□□□ -1.08
PPP4R1-225ENST00000583438 E2F8A0AVK6 867 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 CACNG3O60359 315 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 KLKB1P03952 638 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 APODP05090 189 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 SERPINF2P08697 491 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 H2AFB1P0C5Y9 115 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 H2AFB2P0C5Z0 115 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 DLATP10515 647 aaKnown RBP8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 HOXB2P14652 356 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 ADMP35318 185 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 GNL1P36915 607 aaPredicted RBP8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 CYP2J2P51589 502 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 DLG4P78352 724 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 ZNF33AQ06730 810 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 SCAPQ12770 1279 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 PSMD6Q15008 389 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 SNRNP35Q16560 246 aaKnown RBP8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 C10orf76Q5T2E6 689 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 SNX30Q5VWJ9 437 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 TMEM215Q68D42 235 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 SPOPLQ6IQ16 392 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 LAYNQ6UX15 382 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 BRAPQ7Z569 592 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 NELFCDQ8IXH7 590 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 GRAMD1CQ8IYS0 662 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 C12orf29Q8N999 325 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 TRIML1Q8N9V2 468 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 FSIP1Q8NA03 581 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 OR6B3Q8NGW1 331 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 MDM1Q8TC05 714 aa8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 IPO4Q8TEX9 1081 aaKnown RBP8.31□□□□□ -1.08
PPP4R1-225ENST00000583438 CACTINQ8WUQ7 758 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms