RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 HHLA1C9JL84 531 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 PRAMEF26H0Y7S4 382 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 H3BQV1 296 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 WNT9AO14904 365 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SLC7A4O43246 635 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 RNGTTO60942 597 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SDC3O75056 442 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TCEA3O75764 348 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TBC1D3HP0C7X1 549 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 FECHP22830 423 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 DGKAP23743 735 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 ADORA2BP29275 332 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TLE1Q04724 770 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 BIRC3Q13489 604 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TRIP4Q15650 581 aaPredicted RBP9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 LINC00303Q3SY05 128 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SETMARQ53H47 684 aaPredicted RBP9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 ADGRF1Q5T601 910 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TBC1D3GQ6DHY5 549 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TBC1D3CQ6IPX1 549 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 GPRIN1Q7Z2K8 1008 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SCD5Q86SK9 330 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 MMAAQ8IVH4 418 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 CCDC117Q8IWD4 279 aaPredicted RBP9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TBC1D3Q8IZP1 549 aaPredicted RBP9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 ZSCAN1Q8NBB4 408 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 XXYLT1Q8NBI6 393 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 WDR36Q8NI36 951 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 WDR48Q8TAF3 677 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TAF4BQ92750 862 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 JAKMIP2Q96AA8 810 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 KCTD12Q96CX2 325 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 IFT43Q96FT9 208 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 KLHDC7BQ96G42 594 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SRRTQ9BXP5 876 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 FAM49BQ9NUQ9 324 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SERGEFQ9UGK8 458 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 STOML2Q9UJZ1 356 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 HBS1LQ9Y450 684 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 USP3Q9Y6I4 520 aa9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TLN1Q9Y490 2541 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-224ENST00000582275 EDDM13A0A1B0GTR0 161 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TYW5A2RUC4 315 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 EIF3DO15371 548 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 FFAR2O15552 330 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 IRAK2O43187 625 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SIN3BO75182 1162 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 RPN1P04843 607 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SRPRAP08240 638 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 ITGA2BP08514 1039 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 MYF5P13349 255 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 KRT10P13645 584 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 ITGB6P18564 788 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 NDST1P52848 882 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 NCOA4Q13772 614 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SGSM1Q2NKQ1 1148 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SCARA5Q6ZMJ2 495 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 RBM44Q6ZP01 1051 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 CCDC73Q6ZRK6 1079 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TMC6Q7Z403 805 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TRIM69Q86WT6 500 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SLC25A45Q8N413 288 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 FAM174AQ8TBP5 190 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TTC17Q96AE7 1141 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 CYFIP2Q96F07 1278 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 APOLD1Q96LR9 279 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 LRRC27Q9C0I9 530 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SEPT10Q9P0V9 454 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 CGNQ9P2M7 1197 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 PAXBP1Q9Y5B6 917 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 TEX15Q9BXT5 2789 aa9.09□□□□□ -0.95
CDK5RAP3-224ENST00000582275 SPTBN1Q01082 2364 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 CCDC187A0A096LP49 1063 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 TNFSF15O95150 251 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 KIF20AO95235 890 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 MOCS3O95396 460 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 THEGLP0DJG4 465 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 NNMTP40261 264 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 PSMD8P48556 350 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 SLC8A3P57103 927 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 YWHAGP61981 247 aaKnown RBP eCLIP9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 NFKB2Q00653 900 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 EHHADHQ08426 723 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 EIF3IQ13347 325 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 ELAVL3Q14576 367 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 C9orf64Q5T6V5 341 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 ZCCHC8Q6NZY4 707 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 DSG4Q86SJ6 1040 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 FAM26EQ8N5C1 309 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 C12orf29Q8N999 325 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 IFI44Q8TCB0 444 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 ZNF516Q92618 1163 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 EXTL1Q92935 676 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 WNT2BQ93097 391 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 ATXN7L3BQ96GX2 97 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 DDX50Q9BQ39 737 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 NT5C1AQ9BXI3 368 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 DUSP16Q9BY84 665 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 UBXN6Q9BZV1 441 aa9.08□□□□□ -0.96
CDK5RAP3-224ENST00000582275 SLC25A18Q9H1K4 315 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms