RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	GRIA4	P48058	902 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	GALC	P54803	685 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ARHGAP44	Q17R89	818 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	C9orf64	Q5T6V5	341 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	RNF219	Q5W0B1	726 aa	Predicted RBP	12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	KIAA0895L	Q68EN5	471 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	C19orf48	Q6RUI8	117 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	GLRX5	Q86SX6	157 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PASD1	Q8IV76	773 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	STK40	Q8N2I9	435 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ZNF557	Q8N988	423 aa	Predicted RBP	12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	BAHD1	Q8TBE0	780 aa	Predicted RBP	12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	MDM1	Q8TC05	714 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ZNF606	Q8WXB4	792 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	OMD	Q99983	421 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	ORAI3	Q9BRQ5	295 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	LHX6	Q9UPM6	363 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	KNL1	Q8NG31	2342 aa		12.03	□□□□□ -0.48
CDK5RAP3-223	ENST00000582114	PTPRB	P23467	1997 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FAM170A	A1A519	330 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FAM149A	A5PLN7	773 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PLK4	O00444	970 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	MED7	O43513	233 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GRAP2	O75791	330 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	MOCS3	O95396	460 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GNA14	O95837	355 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TRUB2	O95900	331 aa	Known RBP	12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SLC8A1	P32418	973 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GGCX	P38435	758 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CTSK	P43235	329 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	RPL34	P49207	117 aa	Known RBP	12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CCT8	P50990	548 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	C21orf59	P57076	290 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ECT2L	Q008S8	904 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PDCL	Q13371	301 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	NNT	Q13423	1086 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SUZ12	Q15022	739 aa	Known RBP	12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	USP30	Q70CQ3	517 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PROSER1	Q86XN7	944 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GATAD2A	Q86YP4	633 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ELOA2	Q8IYF1	753 aa	Predicted RBP	12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	RNF34	Q969K3	372 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	IGSF8	Q969P0	613 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CDC6	Q99741	560 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SLC4A5	Q9BY07	1137 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	IRX2	Q9BZI1	471 aa	Predicted RBP	12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CCDC86	Q9H6F5	360 aa	Known RBP	12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FAM204A	Q9H8W3	233 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	EBF2	Q9HAK2	575 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	POPDC2	Q9HBU9	364 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	AASDHPPT	Q9NRN7	309 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	KIAA1522	Q9P206	1035 aa	Predicted RBP	12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CNTN6	Q9UQ52	1028 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PCDHGB2	Q9Y5G2	931 aa		12.02	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TP53BP1	Q12888	1972 aa	Predicted RBP	12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FAM208B	Q5VWN6	2430 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	LAMA5	O15230	3695 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	EDDM13	A0A1B0GTR0	161 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	BECN2	A8MW95	431 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114		F5H5T6	163 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	WNT9A	O14904	365 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	IL1B	P01584	269 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	WNT1	P04628	370 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CAPNS1	P04632	268 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SRPRA	P08240	638 aa	Known RBP	12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	C7	P10643	843 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SLC9A1	P19634	815 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	MZF1	P28698	734 aa	Predicted RBP	12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	METAP1	P53582	386 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	MARS	P56192	900 aa	Known RBP	12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	YWHAZ	P63104	245 aa	Known RBP	12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CENPC	Q03188	943 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	KCNJ12	Q14500	433 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	POM121L1P	Q3SYA9	428 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TRIM65	Q6PJ69	517 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DBX2	Q6ZNG2	339 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TMEM110	Q86TL2	294 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DEFB106A	Q8N104	65 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	AADAT	Q8N5Z0	425 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ATP6V0D2	Q8N8Y2	350 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	OR14C36	Q8NHC7	312 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	BTN2A3P	Q96KV6	586 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	MED15	Q96RN5	788 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CPXM1	Q96SM3	734 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FAM129B	Q96TA1	746 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TRIM62	Q9BVG3	475 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ACE2	Q9BYF1	805 aa	Predicted RBP	12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	THAP9	Q9H5L6	903 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	OSGEP	Q9NPF4	335 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DDIT4	Q9NX09	232 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CELSR3	Q9NYQ7	3312 aa		12.01	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PKD1L2	Q7Z442	2459 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	NYNRIN	Q9P2P1	1898 aa	Known RBP	12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114		A0A1W2PPC4	97 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TARSL2	A2RTX5	802 aa	Known RBP	12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	LRRC72	A6NJI9	287 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	KCNU1	A8MYU2	1149 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CBX4	O00257	560 aa		12	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	IGLV3-25	P01717	112 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms