RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 TSHRP16473 764 aa15.03■□□□□ -0
MKS1-211ENST00000581761 HOXC13P31276 330 aa15.03■□□□□ -0
MKS1-211ENST00000581761 NRG1Q02297 640 aaPredicted RBP15.03■□□□□ -0
MKS1-211ENST00000581761 PPIDQ08752 370 aaKnown RBP15.03■□□□□ -0
MKS1-211ENST00000581761 GALNT2Q10471 571 aa15.03■□□□□ -0
MKS1-211ENST00000581761 WASHC5Q12768 1159 aa15.03■□□□□ -0
MKS1-211ENST00000581761 SEMA5AQ13591 1074 aa15.03■□□□□ -0
MKS1-211ENST00000581761 EMC10Q5UCC4 262 aa15.03■□□□□ -0
MKS1-211ENST00000581761 MANEALQ5VSG8 457 aa15.03■□□□□ -0
MKS1-211ENST00000581761 C14orf80Q86SX3 495 aa15.03■□□□□ -0
MKS1-211ENST00000581761 PALM2Q8IXS6 379 aa15.03■□□□□ -0
MKS1-211ENST00000581761 ATP6V0D2Q8N8Y2 350 aa15.03■□□□□ -0
MKS1-211ENST00000581761 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
MKS1-211ENST00000581761 CELF6Q96J87 481 aaKnown RBP15.03■□□□□ -0
MKS1-211ENST00000581761 CEP295NLQ96MC4 621 aa15.03■□□□□ -0
MKS1-211ENST00000581761 SLC28A3Q9HAS3 691 aa15.03■□□□□ -0
MKS1-211ENST00000581761 MARCH2Q9P0N8 246 aa15.03■□□□□ -0
MKS1-211ENST00000581761 KLHL8Q9P2G9 620 aaPredicted RBP15.03■□□□□ -0
MKS1-211ENST00000581761 SLC12A6Q9UHW9 1150 aa15.03■□□□□ -0
MKS1-211ENST00000581761 NEU3Q9UQ49 428 aa15.03■□□□□ -0
MKS1-211ENST00000581761 CHMP2BQ9UQN3 213 aa15.03■□□□□ -0
MKS1-211ENST00000581761 CLUHO75153 1309 aa15.02■□□□□ -0
MKS1-211ENST00000581761 EXOC1LA0A1B0GW35 172 aa15.02■□□□□ -0
MKS1-211ENST00000581761 LINC01553A4QN01 128 aa15.02■□□□□ -0
MKS1-211ENST00000581761 E9PAM4 449 aa15.02■□□□□ -0
MKS1-211ENST00000581761 SEC24AO95486 1093 aa15.02■□□□□ -0
MKS1-211ENST00000581761 TBX18O95935 607 aa15.02■□□□□ -0
MKS1-211ENST00000581761 HMBSP08397 361 aa15.02■□□□□ -0
MKS1-211ENST00000581761 ZDHHC11BP0C7U3 371 aa15.02■□□□□ -0
MKS1-211ENST00000581761 LINC00271P0C7V0 271 aa15.02■□□□□ -0
MKS1-211ENST00000581761 PTPN3P26045 913 aa15.02■□□□□ -0
MKS1-211ENST00000581761 ATP5DP30049 168 aa15.02■□□□□ -0
MKS1-211ENST00000581761 GARSP41250 739 aaKnown RBP15.02■□□□□ -0
MKS1-211ENST00000581761 ELK3P41970 407 aa15.02■□□□□ -0
MKS1-211ENST00000581761 TUBP50607 506 aa15.02■□□□□ -0
MKS1-211ENST00000581761 GPX6P59796 221 aa15.02■□□□□ -0
MKS1-211ENST00000581761 GNGT1P63211 74 aa15.02■□□□□ -0
MKS1-211ENST00000581761 IFI35P80217 286 aaPredicted RBP15.02■□□□□ -0
MKS1-211ENST00000581761 MTM1Q13496 603 aa15.02■□□□□ -0
MKS1-211ENST00000581761 CCDC38Q502W7 563 aa15.02■□□□□ -0
MKS1-211ENST00000581761 PIK3R6Q5UE93 754 aa15.02■□□□□ -0
MKS1-211ENST00000581761 TPGS2Q68CL5 300 aa15.02■□□□□ -0
MKS1-211ENST00000581761 ZNF771Q7L3S4 317 aaPredicted RBP15.02■□□□□ -0
MKS1-211ENST00000581761 DDX53Q86TM3 631 aaKnown RBP15.02■□□□□ -0
MKS1-211ENST00000581761 MIB1Q86YT6 1006 aa15.02■□□□□ -0
MKS1-211ENST00000581761 ZNF567Q8N184 647 aa15.02■□□□□ -0
MKS1-211ENST00000581761 DEPDC1BQ8WUY9 529 aa15.02■□□□□ -0
MKS1-211ENST00000581761 HDAC11Q96DB2 347 aa15.02■□□□□ -0
MKS1-211ENST00000581761 CDK5RAP1Q96SZ6 601 aaKnown RBP15.02■□□□□ -0
MKS1-211ENST00000581761 WDR83Q9BRX9 315 aaKnown RBP15.02■□□□□ -0
MKS1-211ENST00000581761 CEP41Q9BYV8 373 aa15.02■□□□□ -0
MKS1-211ENST00000581761 CYP4F11Q9HBI6 524 aa15.02■□□□□ -0
MKS1-211ENST00000581761 LGALS13Q9UHV8 139 aa15.02■□□□□ -0
MKS1-211ENST00000581761 INSL6Q9Y581 213 aa15.02■□□□□ -0
MKS1-211ENST00000581761 EPOPA6NHQ4 379 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 A6NNZ2 444 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 KCNK1O00180 336 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 DFFAO00273 331 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 MTSS1O43312 755 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 ABLIM3O94929 683 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 PSMB4P28070 264 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 PPM1AP35813 382 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 MLLT6P55198 1093 aaPredicted RBP15.01□□□□□ -0.01
MKS1-211ENST00000581761 SARNPP82979 210 aaKnown RBP15.01□□□□□ -0.01
MKS1-211ENST00000581761 PARP6Q2NL67 630 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 TUBB8Q3ZCM7 444 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 PPP2R2DQ66LE6 453 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 TADA2BQ86TJ2 420 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 CAND1Q86VP6 1230 aaKnown RBP15.01□□□□□ -0.01
MKS1-211ENST00000581761 RIBC1Q8N443 379 aaPredicted RBP15.01□□□□□ -0.01
MKS1-211ENST00000581761 LZTR1Q8N653 840 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 PDZD8Q8NEN9 1154 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 MAFAQ8NHW3 353 aaPredicted RBP15.01□□□□□ -0.01
MKS1-211ENST00000581761 CFAP36Q96G28 342 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 C1orf74Q96LT6 269 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 SELENOSQ9BQE4 189 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 CCSER2Q9H7U1 834 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 CERS4Q9HA82 394 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 IGSF9Q9P2J2 1179 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 HSFX1Q9UBD0 423 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 CTNNAL1Q9UBT7 734 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 YIPF1Q9Y548 306 aa15.01□□□□□ -0.01
MKS1-211ENST00000581761 REV3LO60673 3130 aa15□□□□□ -0.01
MKS1-211ENST00000581761 POC1B-GALNT4F8VUJ3 575 aa15□□□□□ -0.01
MKS1-211ENST00000581761 TLR5O60602 858 aa15□□□□□ -0.01
MKS1-211ENST00000581761 SHOX2O60902 331 aaPredicted RBP15□□□□□ -0.01
MKS1-211ENST00000581761 CDH16O75309 829 aa15□□□□□ -0.01
MKS1-211ENST00000581761 AVILO75366 819 aa15□□□□□ -0.01
MKS1-211ENST00000581761 CSH1P0DML2 217 aa15□□□□□ -0.01
MKS1-211ENST00000581761 CSH2P0DML3 217 aa15□□□□□ -0.01
MKS1-211ENST00000581761 SSTR1P30872 391 aa15□□□□□ -0.01
MKS1-211ENST00000581761 ALDH1A3P47895 512 aa15□□□□□ -0.01
MKS1-211ENST00000581761 CBLBQ13191 982 aa15□□□□□ -0.01
MKS1-211ENST00000581761 RAB33AQ14088 237 aa15□□□□□ -0.01
MKS1-211ENST00000581761 TMED2Q15363 201 aa15□□□□□ -0.01
MKS1-211ENST00000581761 TAF12Q16514 161 aa15□□□□□ -0.01
MKS1-211ENST00000581761 KLHL38Q2WGJ6 581 aa15□□□□□ -0.01
MKS1-211ENST00000581761 TNFAIP8L3Q5GJ75 292 aa15□□□□□ -0.01
MKS1-211ENST00000581761 MS4A13Q5J8X5 152 aa15□□□□□ -0.01
MKS1-211ENST00000581761 TTC19Q6DKK2 380 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms