RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 HOXD3P31249 432 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 CASP5P51878 434 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 DLX5P56178 289 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 POU5F1BQ06416 359 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 DDR1Q08345 913 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 SEMA3BQ13214 749 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 SAFBQ15424 915 aaKnown RBP eCLIP3.85□□□□□ -1.796e-7■□□□□ 8.9
SMCHD1-206ENST00000581631 MRGPRG-AS1Q2M3A8 158 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 HMBOX1Q6NT76 420 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 CCDC144NLQ6NUI1 221 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 SPSB3Q6PJ21 355 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 CRTC1Q6UUV9 634 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 C16orf89Q6UX73 402 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 Q6ZTK2 550 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 ENGASEQ8NFI3 743 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 TBCBQ99426 244 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 CDT1Q9H211 546 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 TBC1D14Q9P2M4 693 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 MAGED2Q9UNF1 606 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 DHHO43323 396 aa3.84□□□□□ -1.79
SMCHD1-206ENST00000581631 CNTN5O94779 1100 aa3.84□□□□□ -1.79
SMCHD1-206ENST00000581631 FGFR2P21802 821 aa3.84□□□□□ -1.79
SMCHD1-206ENST00000581631 STT3AP46977 705 aa3.84□□□□□ -1.79
SMCHD1-206ENST00000581631 MUC20Q8N307 709 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-206ENST00000581631 RNF152Q8N8N0 203 aa3.84□□□□□ -1.79
SMCHD1-206ENST00000581631 GABPB2Q8TAK5 448 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-206ENST00000581631 HES6Q96HZ4 224 aa3.84□□□□□ -1.79
SMCHD1-206ENST00000581631 A0A0B4J293 547 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 GXYLT2A0PJZ3 443 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 CLCA1A8K7I4 914 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 I6L893 689 aaPredicted RBP3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 APOL1O14791 398 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 KIF3BO15066 747 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 NEURL1O76050 574 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 TRIM27P14373 513 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 POLE2P56282 527 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 SELENOVP59797 346 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 SEC61A1P61619 476 aaKnown RBP3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 IFIT5Q13325 482 aaKnown RBP3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 ZNF718Q3SXZ3 478 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 KSR2Q6VAB6 950 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 SLC16A12Q6ZSM3 486 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 KIAA0408Q6ZU52 694 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 CLIP4Q8N3C7 705 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 NAA15Q9BXJ9 866 aaKnown RBP3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 MAGEB5Q9BZ81 275 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 SPRY4Q9C004 299 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 DDX31Q9H8H2 851 aaKnown RBP3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 MYO1AQ9UBC5 1043 aa3.83□□□□□ -1.8
SMCHD1-206ENST00000581631 A0A1W2PPC4 97 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 AREL1O15033 823 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 SLC16A5O15375 505 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 NCK2O43639 380 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 CCNT2O60583 730 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 ZBTB11O95625 1053 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 NDST3O95803 873 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 GLUD1P00367 558 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 CYP1A2P05177 515 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 FCGR1AP12314 374 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 MYL4P12829 197 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 ZNF12P17014 697 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 TGM2P21980 687 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 GNALP38405 381 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 GLUD2P49448 558 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 SLC37A1P57057 533 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 EEF1A2Q05639 463 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 ILF3Q12906 894 aaKnown RBP eCLIP3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 PMS2P11Q13670 270 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 KRT71Q3SY84 523 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 ZNF672Q499Z4 452 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 FAXCQ5TGI0 409 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 C8orf82Q6P1X6 216 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 MEX3BQ6ZN04 569 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 BEND5Q7L4P6 421 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 CCDC28AQ8IWP9 274 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 CADM3Q8N126 398 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 KDM1BQ8NB78 822 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 CCDC150Q8NCX0 1101 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 PJA1Q8NG27 643 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 TAF15Q92804 592 aaKnown RBP eCLIP3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 WDR77Q9BQA1 342 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 ABHD14AQ9BUJ0 271 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 C1QTNF4Q9BXJ3 329 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 TXNRD2Q9NNW7 524 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 KCNK9Q9NPC2 374 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 FZD10Q9ULW2 581 aa3.82□□□□□ -1.8
SMCHD1-206ENST00000581631 SOCS5O75159 536 aa3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 COQ9O75208 318 aa3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 HARSP12081 509 aaKnown RBP3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 CLCN5P51795 746 aa3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 ATP1A4Q13733 1029 aa3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 GPR18Q14330 331 aa3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 ZRSR1Q15695 479 aaKnown RBP3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 DUSP6Q16828 381 aa3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 LONRF1Q17RB8 773 aa3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 ENTPD8Q5MY95 495 aa3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 FNBP1LQ5T0N5 605 aa3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 RAP1GAP2Q684P5 730 aa3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 MRNIPQ6NTE8 343 aa3.81□□□□□ -1.8
SMCHD1-206ENST00000581631 HIBCHQ6NVY1 386 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms