RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 CCDC40Q4G0X9 1142 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 DCAF6Q58WW2 860 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 FSCBQ5H9T9 825 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 KCNT1Q5JUK3 1230 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 C9orf64Q5T6V5 341 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 SYPL2Q5VXT5 272 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 TTI2Q6NXR4 508 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 RRAGAQ7L523 313 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 CCDC117Q8IWD4 279 aaPredicted RBP10.98□□□□□ -0.65
RFFL-209ENST00000581265 CARNMT1Q8N4J0 409 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 PIP4K2CQ8TBX8 421 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 KREMEN1Q96MU8 473 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 FAM129BQ96TA1 746 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 SLC4A5Q9BY07 1137 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 NUCKS1Q9H1E3 243 aaKnown RBP10.98□□□□□ -0.65
RFFL-209ENST00000581265 NEUROG2Q9H2A3 272 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 ADAMTS1Q9UHI8 967 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 ERVW-1Q9UQF0 538 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 MUC22E2RYF6 1773 aaPredicted RBP10.98□□□□□ -0.65
RFFL-209ENST00000581265 PTPRBP23467 1997 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 WDFY3Q8IZQ1 3526 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 FREM2Q5SZK8 3169 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 CAPN8A6NHC0 703 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 PPP1R3GB7ZBB8 358 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 C1QL1O75973 258 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 LUC7L3O95232 432 aaKnown RBP10.97□□□□□ -0.65
RFFL-209ENST00000581265 BMP6P22004 513 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 SLC8A1P32418 973 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 CCT8P50990 548 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 MARSP56192 900 aaKnown RBP10.97□□□□□ -0.65
RFFL-209ENST00000581265 KCNH2Q12809 1159 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 EIF4EBP2Q13542 120 aaPredicted RBP10.97□□□□□ -0.65
RFFL-209ENST00000581265 CDH18Q13634 790 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 PITRM1Q5JRX3 1037 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 ISM2Q6H9L7 571 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 NCEH1Q6PIU2 408 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 LAYNQ6UX15 382 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 LRRC69Q6ZNQ3 347 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 MMS22LQ6ZRQ5 1243 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 TMEM110Q86TL2 294 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 ARHGEF19Q8IW93 802 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 TRIM59Q8IWR1 403 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 DHX40Q8IX18 779 aaKnown RBP10.97□□□□□ -0.65
RFFL-209ENST00000581265 CFAP52Q8N1V2 620 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 GALNT15Q8N3T1 639 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 GANCQ8TET4 914 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 TRIM62Q9BVG3 475 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 ACE2Q9BYF1 805 aaPredicted RBP10.97□□□□□ -0.65
RFFL-209ENST00000581265 EBF2Q9HAK2 575 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 ST7Q9NRC1 585 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 SERGEFQ9UGK8 458 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 SLCO3A1Q9UIG8 710 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 MAN1B1Q9UKM7 699 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 FZD4Q9ULV1 537 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 TPX2Q9ULW0 747 aaKnown RBP10.97□□□□□ -0.65
RFFL-209ENST00000581265 ITIH6Q6UXX5 1313 aa10.97□□□□□ -0.65
RFFL-209ENST00000581265 HELZ2Q9BYK8 2649 aaKnown RBP10.97□□□□□ -0.65
RFFL-209ENST00000581265 A0A087WV48 116 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 A0A1B0GTQ1 180 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 EDDM13A0A1B0GTR0 161 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 A0A1W2PP55 124 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 BICDL2A1A5D9 508 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 TRABD2BA6NFA1 517 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 FAM47DPA6NHR8 397 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 LRRC72A6NJI9 287 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 GOLGA8CPA6NN73 597 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 TTC34A8MYJ7 566 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 MID1O15344 667 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 ARHGAP6O43182 974 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 MOCS3O95396 460 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 GNA14O95837 355 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 IGLV3-25P01717 112 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 GOT1P17174 413 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 CTSOP43234 321 aaPredicted RBP10.96□□□□□ -0.65
RFFL-209ENST00000581265 CCR5P51681 352 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 C21orf59P57076 290 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 YWHAZP63104 245 aaKnown RBP10.96□□□□□ -0.65
RFFL-209ENST00000581265 ECT2LQ008S8 904 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 CAMK2BQ13554 666 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 SLC12A1Q13621 1099 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 KCNJ12Q14500 433 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 SMAD1Q15797 465 aaKnown RBP10.96□□□□□ -0.65
RFFL-209ENST00000581265 ZC3H12AQ5D1E8 599 aaKnown RBP10.96□□□□□ -0.65
RFFL-209ENST00000581265 DENND1BQ6P3S1 775 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 ADAT2Q7Z6V5 191 aaKnown RBP10.96□□□□□ -0.65
RFFL-209ENST00000581265 MMAAQ8IVH4 418 aaKnown RBP10.96□□□□□ -0.65
RFFL-209ENST00000581265 LSM14AQ8ND56 463 aaKnown RBP10.96□□□□□ -0.65
RFFL-209ENST00000581265 OR2T34Q8NGX1 318 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 NELFBQ8WX92 580 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 ZNF606Q8WXB4 792 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 PTPRN2Q92932 1015 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 SKA1Q96BD8 255 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 FAM149B1Q96BN6 582 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 BTN2A3PQ96KV6 586 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 MED15Q96RN5 788 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 ELF4Q99607 663 aaPredicted RBP10.96□□□□□ -0.65
RFFL-209ENST00000581265 OMDQ99983 421 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 THAP9Q9H5L6 903 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 POPDC2Q9HBU9 364 aa10.96□□□□□ -0.65
RFFL-209ENST00000581265 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms