RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 RETREG1Q9H6L5 497 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 PARD6AQ9NPB6 346 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 MYO1AQ9UBC5 1043 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 IP6K2Q9UHH9 426 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 FBXO10Q9UK96 956 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 USP18Q9UMW8 372 aa10.22□□□□□ -0.77
GGA3-209ENST00000580646 ATG2BQ96BY7 2078 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 FAM170AA1A519 330 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 TYW5A2RUC4 315 aaKnown RBP10.21□□□□□ -0.77
GGA3-209ENST00000580646 BTNL10A8MVZ5 291 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 ESPNB1AK53 854 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 NEDD8-MDP1E9PL57 170 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 SGK1O00141 431 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 MYO1FO00160 1098 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 TRIM24O15164 1050 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 PJA2O43164 708 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 NRDCO43847 1150 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 LRP3O75074 770 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 RNF8O76064 485 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 KLF8O95600 359 aaPredicted RBP10.21□□□□□ -0.77
GGA3-209ENST00000580646 TACR2P21452 398 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 PSMA2P25787 234 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 SLC6A4P31645 630 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 MAN1A1P33908 653 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 ADRA1BP35368 520 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 ARHGAP25P42331 645 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 MAGEA1P43355 309 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 DGKEP52429 567 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 KRT83P78385 493 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 DMTNQ08495 405 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 CRY1Q16526 586 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 CDO1Q16878 200 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 MS4A13Q5J8X5 152 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 EOGTQ5NDL2 527 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 NADSYN1Q6IA69 706 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 GRAMD4Q6IC98 578 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 TMEM92Q6UXU6 159 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 RAD9BQ6WBX8 426 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 KBTBD6Q86V97 674 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 PSTKQ8IV42 348 aaKnown RBP10.21□□□□□ -0.77
GGA3-209ENST00000580646 LRRC8AQ8IWT6 810 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 TERB1Q8NA31 727 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 HJURPQ8NCD3 748 aaPredicted RBP10.21□□□□□ -0.77
GGA3-209ENST00000580646 KCNV2Q8TDN2 545 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 LOXL4Q96JB6 756 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 PACSIN1Q9BY11 444 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 OSBPL2Q9H1P3 480 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 DNAJC17Q9NVM6 304 aaKnown RBP10.21□□□□□ -0.77
GGA3-209ENST00000580646 CTTNBP2NLQ9P2B4 639 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 ANAPC7Q9UJX3 599 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 PCDHA13Q9Y5I0 950 aa10.21□□□□□ -0.77
GGA3-209ENST00000580646 IGLV3-10A0A075B6K4 115 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 SYNJ2BP-COX16A0A087WUM0 186 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 PRR5-ARHGAP8B1AHC4 643 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 F5H5T6 163 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 I6L893 689 aaPredicted RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 DCLK1O15075 740 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 ADAM23O75077 832 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 LRCH4O75427 683 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 PAGE1O75459 146 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 ALDH1A2O94788 518 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 MOCS2O96007 188 aaPredicted RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 CISD3P0C7P0 127 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 TPRP12270 2363 aaKnown RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 HNRNPLP14866 589 aaKnown RBP eCLIP10.2□□□□□ -0.78
GGA3-209ENST00000580646 HTR7P34969 479 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 VAV2P52735 878 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 ZNF135P52742 658 aaPredicted RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 ATXN1P54253 815 aaKnown RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 ARHGAP8P85298 464 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 LMNB2Q03252 620 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 AUHQ13825 339 aaKnown RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 PUM1Q14671 1186 aaKnown RBP eCLIP10.2□□□□□ -0.78
GGA3-209ENST00000580646 RSPO4Q2I0M5 234 aaPredicted RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 PLK5Q496M5 336 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 USP39Q53GS9 565 aaKnown RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 RABGAP1LQ5R372 815 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 SH3PXD2AQ5TCZ1 1133 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 ANO7Q6IWH7 933 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 SLFN11Q7Z7L1 901 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 RASSF3Q86WH2 238 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 FAM131BQ86XD5 332 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 ZNF683Q8IZ20 524 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 ZNF513Q8N8E2 541 aaPredicted RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 SLC35G2Q8TBE7 412 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 BHMTQ93088 406 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 TMA16Q96EY4 203 aaKnown RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 ZC3H10Q96K80 434 aaKnown RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 CNTNAP3BQ96NU0 1288 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 CNTNAP3Q9BZ76 1288 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 POLMQ9NP87 494 aaPredicted RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 ZDHHC4Q9NPG8 344 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 ANLNQ9NQW6 1124 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 SEMA4GQ9NTN9 838 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 DLL3Q9NYJ7 618 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 COX16Q9P0S2 106 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 PPARGC1AQ9UBK2 798 aaKnown RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 XPO7Q9UIA9 1087 aaKnown RBP10.2□□□□□ -0.78
GGA3-209ENST00000580646 HCN2Q9UL51 889 aa10.2□□□□□ -0.78
GGA3-209ENST00000580646 SLC27A6Q9Y2P4 619 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms