RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PDIA2Q13087 525 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-217ENST00000580287 C2orf15Q8WU43 125 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-217ENST00000580287 P3H4Q92791 437 aa13.06□□□□□ -0.32
CDK5RAP3-217ENST00000580287 PGAP3Q96FM1 320 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ARHGEF4Q9NR80 690 aa13.06□□□□□ -0.32
CDK5RAP3-217ENST00000580287 FGFR1OP2Q9NVK5 253 aa13.06□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-217ENST00000580287 EXOC1LA0A1B0GW35 172 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 TLR5O60602 858 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 RTN3O95197 1032 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ATP5DP30049 168 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 BASP1P80723 227 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 TMED2Q15363 201 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 TAF12Q16514 161 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 FAM133BQ5BKY9 247 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 DARS2Q6PI48 645 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 DNAJB7Q7Z6W7 309 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 SRRM1Q8IYB3 904 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 PHOSPHO2Q8TCD6 241 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 SLC22A17Q8WUG5 538 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 CYP2S1Q96SQ9 504 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ZNF670Q9BS34 389 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 OXCT2Q9BYC2 517 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 SMOC2Q9H3U7 446 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ACTR5Q9H9F9 607 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 RPS6KL1Q9Y6S9 549 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 C2orf78A6NCI8 922 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 H7C0C1 242 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 APOC4-APOC2K7ER74 178 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 APOL1O14791 398 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 KIF1CO43896 1103 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 PAGE1O75459 146 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 CAPN15O75808 1086 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 LRIG2O94898 1065 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 F9P00740 461 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 APOC2P02655 101 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 GJA1P17302 382 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ATP5OP48047 213 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 KCNQ1P51787 676 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 MORF4L2Q15014 288 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 WLSQ5T9L3 541 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 TPGS2Q68CL5 300 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 NCBP2-AS2Q69YL0 99 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 C14orf80Q86SX3 495 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 RBM23Q86U06 439 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 KLHL5Q96PQ7 755 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 KIF9Q9HAQ2 790 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 GKN1Q9NS71 199 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 YBX2Q9Y2T7 364 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 INSL5Q9Y5Q6 135 aa13.05□□□□□ -0.32
CDK5RAP3-217ENST00000580287 SLC12A8A0AV02 714 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 C5orf60A6NFR6 353 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 TCP11X1B4DZS4 312 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 EEF2KO00418 725 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ARL4AP40617 200 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 RNASEH2BQ5TBB1 312 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 SLC9A4Q6AI14 798 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 RWDD4Q6NW29 188 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 RFX8Q6ZV50 586 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 CENPUQ71F23 418 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 FAF2Q96CS3 445 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 RNF38Q9H0F5 515 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ZNF334Q9HCZ1 680 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ABCF3Q9NUQ8 709 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 MARCH2Q9P0N8 246 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 EFR3BQ9Y2G0 817 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 MYO9BQ13459 2157 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ZNF840PA6NDX5 716 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 RFPL2O75678 378 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ERCC2P18074 760 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 EPHB2P29323 1055 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 CCR1P32246 355 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 RPL22P35268 128 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 SCTRP47872 440 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 SNCBQ16143 134 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 HIF1AQ16665 826 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ANKRD22Q5VYY1 191 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 CYB5D1Q6P9G0 228 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 CEP128Q6ZU80 1094 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 PARP9Q8IXQ6 854 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 MRPL43Q8N983 215 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 FCRL2Q96LA5 508 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 SLC22A12Q96S37 553 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 LGMNQ99538 433 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 RXFP1Q9HBX9 757 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 DTLQ9NZJ0 730 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 MPP6Q9NZW5 540 aa13.04□□□□□ -0.32
CDK5RAP3-217ENST00000580287 C2orf71A6NGG8 1288 aa13.03□□□□□ -0.32
CDK5RAP3-217ENST00000580287 F5H423 210 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-217ENST00000580287 MFSD11O43934 449 aa13.03□□□□□ -0.32
CDK5RAP3-217ENST00000580287 CDH16O75309 829 aa13.03□□□□□ -0.32
CDK5RAP3-217ENST00000580287 SPAG7O75391 227 aa13.03□□□□□ -0.32
CDK5RAP3-217ENST00000580287 BRAFP15056 766 aa13.03□□□□□ -0.32
CDK5RAP3-217ENST00000580287 TBX4P57082 545 aa13.03□□□□□ -0.32
CDK5RAP3-217ENST00000580287 TFDP2Q14188 446 aa13.03□□□□□ -0.32
CDK5RAP3-217ENST00000580287 STAT4Q14765 748 aa13.03□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ARL13BQ3SXY8 428 aa13.03□□□□□ -0.32
CDK5RAP3-217ENST00000580287 ZNF697Q5TEC3 545 aa13.03□□□□□ -0.32
CDK5RAP3-217ENST00000580287 TMEM150AQ86TG1 271 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms