RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 TLR6Q9Y2C9 796 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 CEP83Q9Y592 693 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 PCDHB4Q9Y5E5 795 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 SNX11Q9Y5W9 270 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 ATRXP46100 2492 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 EDDM13A0A1B0GTR0 161 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 VILLO15195 856 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 P4HA2O15460 535 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 DKK1O94907 266 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 SLC9A1P19634 815 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 NNMTP40261 264 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 ACADSBP45954 432 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 BNC1Q01954 994 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 KCNMA1Q12791 1236 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 ARID5BQ14865 1188 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 CNGA2Q16280 664 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 MAN2A1Q16706 1144 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 VWA3BQ502W6 1294 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 PKDCCQ504Y2 493 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 SLCO6A1Q86UG4 719 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 LUZP1Q86V48 1076 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 PPM1KQ8N3J5 372 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 OXR1Q8N573 874 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 UBR7Q8N806 425 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 ZNF366Q8N895 744 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 FIBINQ8TAL6 211 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 TTC17Q96AE7 1141 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 CRACR2AQ9BSW2 395 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 TJP2Q9UDY2 1190 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 LIMA1Q9UHB6 759 aaKnown RBP13.85□□□□□ -0.19
TRAF4-214ENST00000580073 AJAP1Q9UKB5 411 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-214ENST00000580073 PCDHGA1Q9Y5H4 931 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 DMXL2Q8TDJ6 3036 aa13.85□□□□□ -0.19
TRAF4-214ENST00000580073 KNL1Q8NG31 2342 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 A0A1W2PPC4 97 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 TARSL2A2RTX5 802 aaKnown RBP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 EIF4E1BA6NMX2 242 aaKnown RBP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 GOLGA8CPA6NN73 597 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 ADH1BP00325 375 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 CAPNS1P04632 268 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 ATXN1LP0C7T5 689 aaKnown RBP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 ABCB4P21439 1286 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 EEF1GP26641 437 aaKnown RBP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 CD70P32970 193 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 NUDT1P36639 197 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 CTSKP43235 329 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 ARRB1P49407 418 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 OXCT1P55809 520 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 MTA1Q13330 715 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 MEA1Q16626 185 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 HNRNPA1L2Q32P51 320 aaKnown RBP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 FAM133BQ5BKY9 247 aaKnown RBP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 TTC39BQ5VTQ0 682 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 RFWD3Q6PCD5 774 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 GJB7Q6PEY0 223 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 SND1Q7KZF4 910 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 PDZD3Q86UT5 571 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 PDCD7Q8N8D1 485 aaKnown RBP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 OR2T34Q8NGX1 318 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 MDM1Q8TC05 714 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 SLC35F5Q8WV83 523 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 NDRG1Q92597 394 aaKnown RBP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 FAM149B1Q96BN6 582 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 NXPE2Q96DL1 559 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 PPP1R9BQ96SB3 815 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 OMDQ99983 421 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 INTS2Q9H0H0 1204 aaKnown RBP13.84□□□□□ -0.19
TRAF4-214ENST00000580073 VPS16Q9H269 839 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 NDST4Q9H3R1 872 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 SIX2Q9NPC8 291 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 TOR4AQ9NXH8 423 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 FBXL12Q9NXK8 326 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 STIM2Q9P246 746 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 ITIH6Q6UXX5 1313 aa13.84□□□□□ -0.19
TRAF4-214ENST00000580073 FREM2Q5SZK8 3169 aa13.83□□□□□ -0.19
TRAF4-214ENST00000580073 ZFYVE26Q68DK2 2539 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 FAM47DPA6NHR8 397 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 LRRC10BA6NIK2 292 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 CAPN9O14815 690 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 MED7O43513 233 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 MAGEC1O60732 1142 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 LUC7L3O95232 432 aaKnown RBP13.83□□□□□ -0.2
TRAF4-214ENST00000580073 PRKCSHP14314 528 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-214ENST00000580073 CSKP41240 450 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 RGS7P49802 495 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 KLK7P49862 253 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 COPB1P53618 953 aaKnown RBP13.83□□□□□ -0.2
TRAF4-214ENST00000580073 GCNT1Q02742 428 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 SLC12A1Q13621 1099 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 SMAD1Q15797 465 aaKnown RBP13.83□□□□□ -0.2
TRAF4-214ENST00000580073 CST6Q15828 149 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 BEND5Q7L4P6 421 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 DSG4Q86SJ6 1040 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 FAM114A1Q8IWE2 563 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 CARNMT1Q8N4J0 409 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 KREMEN1Q96MU8 473 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 ELF4Q99607 663 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-214ENST00000580073 GDF3Q9NR23 364 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 AASDHPPTQ9NRN7 309 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 ADAMTS1Q9UHI8 967 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms