RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 TBC1D3DA0A087WVF3 549 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TBC1D3IA0A087WXS9 549 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TBC1D3EA0A087X179 549 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TBC1D3KA0A087X1G2 549 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TBC1D3FA6NER0 549 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TBC1D3LB9A6J9 549 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 DXOO77932 396 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 MT-CO3P00414 261 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TBC1D3HP0C7X1 549 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 PDIA4P13667 645 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 GTF2H1P32780 548 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 CSKP41240 450 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 ADPRHP54922 357 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 ERVPABLB-1P60509 514 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 KCNC4Q03721 635 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 BST2Q10589 180 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 ZNF211Q13398 564 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 C9orf64Q5T6V5 341 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 RNF219Q5W0B1 726 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 KRT39Q6A163 491 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TBC1D3GQ6DHY5 549 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TBC1D3CQ6IPX1 549 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 KDM7AQ6ZMT4 941 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 DHX40Q8IX18 779 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TBC1D3Q8IZP1 549 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 SIX6OS1Q8N1H7 587 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 SCML4Q8N228 414 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 KIAA0895Q8NCT3 520 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 WFDC5Q8TCV5 224 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 INTS4Q96HW7 963 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 HIC2Q96JB3 615 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TMEM8AQ9HCN3 771 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 CNGB3Q9NQW8 809 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 CISHQ9NSE2 258 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 SFMBT1Q9UHJ3 866 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 TRAF3IP3Q9Y228 551 aa12.66□□□□□ -0.38
CDK5RAP3-216ENST00000579853 ITIH6Q6UXX5 1313 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 ACSL4O60488 711 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 MYL1P05976 194 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 NNMTP40261 264 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 RAD23BP54727 409 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 DAB2P98082 770 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 ADIGQ0VDE8 80 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 CDH18Q13634 790 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 ELAVL3Q14576 367 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 STAT4Q14765 748 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 NFIL3Q16649 462 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 ARHGAP40Q5TG30 622 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 MSANTD2Q6P1R3 559 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 RFWD3Q6PCD5 774 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 BHLHA9Q7RTU4 235 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 KANSL1Q7Z3B3 1105 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 SNRNP27Q8WVK2 155 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 KCNE4Q8WWG9 221 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 EDEM1Q92611 657 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 LMLNQ96KR4 655 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 MRGPRX3Q96LB0 322 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 DEPDC7Q96QD5 511 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 MTG2Q9H4K7 406 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 EVA1BQ9NVM1 165 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 ERVW-1Q9UQF0 538 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 CEP83Q9Y592 693 aa12.65□□□□□ -0.38
CDK5RAP3-216ENST00000579853 USP9XQ93008 2570 aaPredicted RBP12.65□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NOTCH2Q04721 2471 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 YJEFN3A6XGL0 299 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 E7ENQ6 273 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 WNT9AO14904 365 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SLC7A4O43246 635 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MSI1O43347 362 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SIGLEC6O43699 453 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 KLRC4O43908 158 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 STX10O60499 249 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 RNGTTO60942 597 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 IGLV3-27P01718 113 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 GP1BAP07359 652 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TRIM49P0CI25 452 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 TRIM49CP0CI26 452 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SETSIPP0DME0 302 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 NR2F2P24468 414 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PSMC2P35998 433 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 LSSP48449 732 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PSMD8P48556 350 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SGSHP51688 502 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 ECT2LQ008S8 904 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 PPP3CAQ08209 521 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 VAC14Q08AM6 782 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SGO2Q562F6 1265 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 FAM133BQ5BKY9 247 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 DSG4Q86SJ6 1040 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 SPATS2Q86XZ4 545 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 FAM186BQ8IYM0 893 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 AADATQ8N5Z0 425 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 FBXL13Q8NEE6 735 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 KCTD13Q8WZ19 329 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 IRGQQ8WZA9 623 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 MED8Q96G25 268 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 FAM129BQ96TA1 746 aa12.64□□□□□ -0.39
CDK5RAP3-216ENST00000579853 POLR1BQ9H9Y6 1135 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms