RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 LRRC38Q5VT99 294 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 TXNRD3NBQ6F5E7 133 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 ASTLQ6HA08 431 aaPredicted RBP16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 POLNQ7Z5Q5 900 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 ANKS1BQ7Z6G8 1248 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 CPNE8Q86YQ8 564 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 MAP7D3Q8IWC1 876 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 RHOT1Q8IXI2 618 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 SYCE1Q8N0S2 351 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 ZNF687Q8N1G0 1237 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 PHTF2Q8N3S3 785 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 KCTD6Q8NC69 237 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 PJA1Q8NG27 643 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 WFIKKN2Q8TEU8 576 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 ATRIPQ8WXE1 791 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 KCTD15Q96SI1 283 aaPredicted RBP16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 ABCB8Q9NUT2 735 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 DONSONQ9NYP3 566 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 GGA2Q9UJY4 613 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 GUCA1BQ9UMX6 200 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 HYOU1Q9Y4L1 999 aa16.02■□□□□ 0.16
SLC6A4-205ENST00000579221 K7EQS6 105 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 FGF10O15520 208 aaPredicted RBP16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 ZSCAN12O43309 604 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 GPR37L1O60883 481 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 PABPC1P11940 636 aaKnown RBP16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 HLA-FP30511 346 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 HOXC13P31276 330 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 GJC1P36383 396 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 IRAK1P51617 712 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 CDH6P55285 790 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 LMAN2Q12907 356 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 DMC1Q14565 340 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 PDK2Q15119 407 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 ATP13A4Q4VNC1 1196 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 ODF2Q5BJF6 829 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 FSCBQ5H9T9 825 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 ARTNQ5T4W7 220 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 C6orf118Q5T5N4 469 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 KIAA0907Q7Z7F0 614 aaPredicted RBP16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 SETD3Q86TU7 594 aaPredicted RBP16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 AHI1Q8N157 1196 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 WFDC5Q8TCV5 224 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 UCMAQ8WVF2 138 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 CLDN23Q96B33 292 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 C1QTNF1Q9BXJ1 281 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 LZTFL1Q9NQ48 299 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 TMEM248Q9NWD8 314 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 DDX56Q9NY93 547 aaKnown RBP16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 TBC1D30Q9Y2I9 924 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 COL4A2P08572 1712 aa16.01■□□□□ 0.15
SLC6A4-205ENST00000579221 WASH4PA8MWX3 477 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 RHOCP08134 193 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 TNNT1P13805 278 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 POLR2EP19388 210 aaKnown RBP16■□□□□ 0.15
SLC6A4-205ENST00000579221 AOC1P19801 751 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 CD70P32970 193 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 MAGEA9P43362 315 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 RPS9P46781 194 aaKnown RBP16■□□□□ 0.15
SLC6A4-205ENST00000579221 MAPKAPK2P49137 400 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 PLK1P53350 603 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 MESP2Q0VG99 397 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 FZD5Q13467 585 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 CCINQ13939 588 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 GEN1Q17RS7 908 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 RNF219Q5W0B1 726 aaPredicted RBP16■□□□□ 0.15
SLC6A4-205ENST00000579221 CWF19L1Q69YN2 538 aaKnown RBP16■□□□□ 0.15
SLC6A4-205ENST00000579221 RFX8Q6ZV50 586 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 TFAP2DQ7Z6R9 452 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 FBXL6Q8N531 539 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 KCNV2Q8TDN2 545 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 UBE2Q2Q8WVN8 375 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 LMLNQ96KR4 655 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 PCDH18Q9HCL0 1135 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 ELOVL2Q9NXB9 296 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 CWC15Q9P013 229 aaKnown RBP16■□□□□ 0.15
SLC6A4-205ENST00000579221 RCOR3Q9P2K3 495 aaPredicted RBP16■□□□□ 0.15
SLC6A4-205ENST00000579221 AMFRQ9UKV5 643 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 STARD13Q9Y3M8 1113 aa16■□□□□ 0.15
SLC6A4-205ENST00000579221 ILVBLA1L0T0 632 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 GRID2IPA4D2P6 1211 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 PRRT4C9JH25 899 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 PSTPIP1O43586 416 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 PALMO75781 387 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 ATP5BP06576 529 aaKnown RBP15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 DCNP07585 359 aaKnown RBP15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 GOT1P17174 413 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 KDELR1P24390 212 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 CSKP41240 450 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 ARSEP51690 589 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 SEC13P55735 322 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 MRPS21P82921 87 aaKnown RBP15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 EIF4HQ15056 248 aaKnown RBP15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 TMEM31Q5JXX7 168 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 MBLAC2Q68D91 279 aa15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 CXorf57Q6NSI4 855 aaKnown RBP15.99■□□□□ 0.15
SLC6A4-205ENST00000579221 ZNF783Q6ZMS7 281 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms