RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 IQCHQ86VS3 1027 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 SLC9A9Q8IVB4 645 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 CCDC117Q8IWD4 279 aaPredicted RBP9.46□□□□□ -0.9
PTPRM-210ENST00000578916 AADATQ8N5Z0 425 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 GPATCH11Q8N954 259 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 KDM1BQ8NB78 822 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 FIBINQ8TAL6 211 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 SNRNP27Q8WVK2 155 aaKnown RBP9.46□□□□□ -0.9
PTPRM-210ENST00000578916 EDEM1Q92611 657 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 VCPIP1Q96JH7 1222 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 IPO9Q96P70 1041 aaKnown RBP9.46□□□□□ -0.9
PTPRM-210ENST00000578916 IRX2Q9BZI1 471 aaPredicted RBP9.46□□□□□ -0.9
PTPRM-210ENST00000578916 NIF3L1Q9GZT8 377 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 ABCG4Q9H172 646 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 POLR1BQ9H9Y6 1135 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 MAGEF1Q9HAY2 307 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 LRRC4Q9HBW1 653 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 PPP4R2Q9NY27 417 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 ERVW-1Q9UQF0 538 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 FRMD4BQ9Y2L6 1034 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 CEP83Q9Y592 693 aa9.46□□□□□ -0.9
PTPRM-210ENST00000578916 HEMK1Q9Y5R4 338 aaPredicted RBP9.46□□□□□ -0.9
PTPRM-210ENST00000578916 PLXNA2O75051 1894 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 MYH10P35580 1976 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 GOLGA6L7A0A1B0GV03 622 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 TYW5A2RUC4 315 aaKnown RBP9.45□□□□□ -0.9
PTPRM-210ENST00000578916 TTC34A8MYJ7 566 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 C10orf142B7Z368 130 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 IRAK2O43187 625 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 MSI1O43347 362 aaKnown RBP9.45□□□□□ -0.9
PTPRM-210ENST00000578916 LATO43561 262 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 CSO75390 466 aaKnown RBP9.45□□□□□ -0.9
PTPRM-210ENST00000578916 MOCS3O95396 460 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 IL1BP01584 269 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 NR3C1P04150 777 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 SRPRAP08240 638 aaKnown RBP9.45□□□□□ -0.9
PTPRM-210ENST00000578916 KRT10P13645 584 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 RBMS1P29558 406 aaKnown RBP9.45□□□□□ -0.9
PTPRM-210ENST00000578916 MAT2AP31153 395 aaKnown RBP9.45□□□□□ -0.9
PTPRM-210ENST00000578916 NUDT1P36639 197 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 VAMP7P51809 220 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 ARID5BQ14865 1188 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 C1orf220Q5T0J3 134 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 KIAA1614Q5VZ46 1190 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 RNF219Q5W0B1 726 aaPredicted RBP9.45□□□□□ -0.9
PTPRM-210ENST00000578916 BSPRYQ5W0U4 402 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 TMC6Q7Z403 805 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 LURAP1LQ8IV03 231 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 UNC45BQ8IWX7 931 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 STK40Q8N2I9 435 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 SLC25A45Q8N413 288 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 CARNMT1Q8N4J0 409 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 TTC39CQ8N584 583 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 ANKRD52Q8NB46 1076 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 HJURPQ8NCD3 748 aaPredicted RBP9.45□□□□□ -0.9
PTPRM-210ENST00000578916 OR4C6Q8NH72 309 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 KLHDC7BQ96G42 594 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 LMLNQ96KR4 655 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 MRGPRX3Q96LB0 322 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 FAM129BQ96TA1 746 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTPRM-210ENST00000578916 ABCC13Q9NSE7 274 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 IL17BQ9UHF5 180 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 CYTH4Q9UIA0 394 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 DMTF1Q9Y222 760 aa9.45□□□□□ -0.9
PTPRM-210ENST00000578916 A0A1B0GVM2 712 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 K7ENP7 123 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 SPTLC2O15270 562 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 POLR2DO15514 142 aaKnown RBP9.44□□□□□ -0.9
PTPRM-210ENST00000578916 FFAR2O15552 330 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 ACSL4O60488 711 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 ALPPL2P10696 532 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 CKMT1AP12532 417 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 DGKAP23743 735 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 MZF1P28698 734 aaPredicted RBP9.44□□□□□ -0.9
PTPRM-210ENST00000578916 SLC6A4P31645 630 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 CTSOP43234 321 aaPredicted RBP9.44□□□□□ -0.9
PTPRM-210ENST00000578916 AFMP43652 599 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 GCLMP48507 274 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 NASPP49321 788 aaPredicted RBP9.44□□□□□ -0.9
PTPRM-210ENST00000578916 DUSP3P51452 185 aaPredicted RBP9.44□□□□□ -0.9
PTPRM-210ENST00000578916 ECT2LQ008S8 904 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 CUL4BQ13620 913 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 CDH18Q13634 790 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 SGO2Q562F6 1265 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 PITRM1Q5JRX3 1037 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 NUGGCQ68CJ6 796 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 ARHGAP17Q68EM7 881 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 INO80CQ6PI98 192 aaPredicted RBP9.44□□□□□ -0.9
PTPRM-210ENST00000578916 BHLHA9Q7RTU4 235 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 SIX6OS1Q8N1H7 587 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 SLC4A11Q8NBS3 891 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 LINC00301Q8NCQ3 95 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 TAS1R2Q8TE23 839 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 TMEM174Q8WUU8 243 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 TATDN2Q93075 761 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 DDX50Q9BQ39 737 aaKnown RBP9.44□□□□□ -0.9
PTPRM-210ENST00000578916 OSBPL2Q9H1P3 480 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 MMRN2Q9H8L6 949 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 ASCL3Q9NQ33 180 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms