RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 HS1BP3Q53T59 392 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 CAPRIN2Q6IMN6 1127 aaKnown RBP11.52□□□□□ -0.57
GGA3-206ENST00000578773 BORAQ6PGQ7 559 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.52□□□□□ -0.57
GGA3-206ENST00000578773 RSRC2Q7L4I2 434 aaKnown RBP11.52□□□□□ -0.57
GGA3-206ENST00000578773 ZNF720Q7Z2F6 126 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 TRAPPC11Q7Z392 1133 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 IQCHQ86VS3 1027 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 CBWD2Q8IUF1 395 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 CPXM2Q8N436 756 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 FBXO39Q8N4B4 442 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.52□□□□□ -0.57
GGA3-206ENST00000578773 SLC2A14Q8TDB8 520 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 WFIKKN2Q8TEU8 576 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 KLHDC7BQ96G42 594 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 CALN1Q9BXU9 219 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 SLC2A11Q9BYW1 496 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 ST6GALNAC4Q9H4F1 302 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 CSNK1G1Q9HCP0 422 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 KLHL11Q9NVR0 708 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 COMMD8Q9NX08 183 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 PISDQ9UG56 409 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 NAGPAQ9UK23 515 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 ACSL6Q9UKU0 697 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 INTS6Q9UL03 887 aaKnown RBP11.52□□□□□ -0.57
GGA3-206ENST00000578773 LRP4O75096 1905 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 MTORP42345 2549 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 PCNX1Q96RV3 2341 aa11.52□□□□□ -0.57
GGA3-206ENST00000578773 WIPF3A6NGB9 483 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 K7EM74 188 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 SCAMP1O15126 338 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 TNNC2P02585 160 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 CYBBP04839 570 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 GOT1P17174 413 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 ADORA2BP29275 332 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 MLLT3P42568 568 aaPredicted RBP11.51□□□□□ -0.57
GGA3-206ENST00000578773 MYL6P60660 151 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 SFSWAPQ12872 951 aaKnown RBP11.51□□□□□ -0.57
GGA3-206ENST00000578773 STAT4Q14765 748 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 DEFB133Q30KQ1 61 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 HNRNPA1L2Q32P51 320 aaKnown RBP11.51□□□□□ -0.57
GGA3-206ENST00000578773 OR6B2Q6IFH4 312 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 KLHDC10Q6PID8 442 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 DTHD1Q6ZMT9 781 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 SND1Q7KZF4 910 aaKnown RBP eCLIP11.51□□□□□ -0.57
GGA3-206ENST00000578773 AHI1Q8N157 1196 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 C12orf29Q8N999 325 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 ZNF548Q8NEK5 533 aaPredicted RBP11.51□□□□□ -0.57
GGA3-206ENST00000578773 MYEOVQ96EZ4 313 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 PPP1R13BQ96KQ4 1090 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 LMLNQ96KR4 655 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 FOXP1Q9H334 677 aaPredicted RBP11.51□□□□□ -0.57
GGA3-206ENST00000578773 SUN2Q9UH99 717 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 KLF15Q9UIH9 416 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 RABGEF1Q9UJ41 708 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 SCML1Q9UN30 329 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 ATP8B3O60423 1300 aa11.51□□□□□ -0.57
GGA3-206ENST00000578773 CROCCQ5TZA2 2017 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 SLC12A8A0AV02 714 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 EME2A4GXA9 379 aaPredicted RBP11.5□□□□□ -0.57
GGA3-206ENST00000578773 SLC31A1O15431 190 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 TBCAO75347 108 aaKnown RBP11.5□□□□□ -0.57
GGA3-206ENST00000578773 PRPF6O94906 941 aaKnown RBP11.5□□□□□ -0.57
GGA3-206ENST00000578773 PRKCGP05129 697 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 KRT18P05783 430 aaKnown RBP11.5□□□□□ -0.57
GGA3-206ENST00000578773 ALPPL2P10696 532 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 PRF1P14222 555 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 OXCT1P55809 520 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 TNNC1P63316 161 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 POSTNQ15063 836 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 TPRG1LQ5T0D9 272 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 MMS22LQ6ZRQ5 1243 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 CLEC20AQ6ZU45 233 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 RAB11FIP2Q7L804 512 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 PRPF39Q86UA1 669 aaKnown RBP11.5□□□□□ -0.57
GGA3-206ENST00000578773 TMEM145Q8NBT3 493 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 CDK5RAP3Q96JB5 506 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 XYLT2Q9H1B5 865 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 FBXO44Q9H4M3 255 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 PREBQ9HCU5 417 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.5□□□□□ -0.57
GGA3-206ENST00000578773 DNAJC28Q9NX36 388 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 SARDHQ9UL12 918 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 ZNF510Q9Y2H8 683 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 KIF3AQ9Y496 699 aa11.5□□□□□ -0.57
GGA3-206ENST00000578773 POLR2EP19388 210 aaKnown RBP11.49□□□□□ -0.57
GGA3-206ENST00000578773 MZF1P28698 734 aaPredicted RBP11.49□□□□□ -0.57
GGA3-206ENST00000578773 PRPHP41219 470 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 CSKP41240 450 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 HARS2P49590 506 aaKnown RBP11.49□□□□□ -0.57
GGA3-206ENST00000578773 KRTAP21-3Q3LHN1 58 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 MPPE1Q53F39 396 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 L1TD1Q5T7N2 865 aaKnown RBP11.49□□□□□ -0.57
GGA3-206ENST00000578773 FHL5Q5TD97 284 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 RFWD3Q6PCD5 774 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 GCNT7Q6ZNI0 430 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 DTX1Q86Y01 620 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 SLC35F3Q8IY50 421 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 C9orf43Q8TAL5 461 aaPredicted RBP11.49□□□□□ -0.57
GGA3-206ENST00000578773 ZNF516Q92618 1163 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms