RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 MTA1Q13330 715 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 ST3GAL2Q16842 350 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 RABGAP1LQ5R372 815 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 C9orf64Q5T6V5 341 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 RNF219Q5W0B1 726 aaPredicted RBP16.39■□□□□ 0.21
CRLF3-203ENST00000578692 FBXL22Q6P050 247 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 SLC26A9Q7LBE3 791 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 ZDHHC17Q8IUH5 632 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 CCAR2Q8N163 923 aaKnown RBP16.39■□□□□ 0.21
CRLF3-203ENST00000578692 TMEM35BQ8NCS4 154 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 ZNF397Q8NF99 534 aaPredicted RBP16.39■□□□□ 0.21
CRLF3-203ENST00000578692 SNX19Q92543 992 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 RPL10LQ96L21 214 aaKnown RBP16.39■□□□□ 0.21
CRLF3-203ENST00000578692 LMBRD1Q9NUN5 540 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 WASF3Q9UPY6 502 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.39■□□□□ 0.21
CRLF3-203ENST00000578692 PCNX2A6NKB5 2137 aa16.39■□□□□ 0.21
CRLF3-203ENST00000578692 EDDM13A0A1B0GTR0 161 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 A0A1B0GVM2 712 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 SPAARA0A1B0GVQ0 90 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 TCAF2A6NFQ2 919 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 M0QYT0 321 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 DAB1O75553 588 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 TOP3BO95985 862 aaKnown RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 CYP11B1P15538 503 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 ANP32AP39687 249 aaKnown RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 NNMTP40261 264 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 MATKP42679 507 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 PLK1P53350 603 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 SIM1P81133 766 aaPredicted RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 SFSWAPQ12872 951 aaKnown RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 HNRNPDQ14103 355 aaKnown RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 TCP11X2Q5H9J9 407 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 TTC39BQ5VTQ0 682 aaPredicted RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 USP30Q70CQ3 517 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 CIR1Q86X95 450 aaPredicted RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 GANCQ8TET4 914 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 BIRC7Q96CA5 298 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 RPRD1AQ96P16 312 aaPredicted RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 PABPC3Q9H361 631 aaKnown RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 FBXL12Q9NXK8 326 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 RRN3Q9NYV6 651 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 FHOD1Q9Y613 1164 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 ITIH6Q6UXX5 1313 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 SH3BP5O60239 455 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 FSBPO95073 299 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 UCHL3P15374 230 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 PDGFRAP16234 1089 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 SPINK2P20155 84 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 EEF1GP26641 437 aaKnown RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 MZF1P28698 734 aaPredicted RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 CSNK1EP49674 416 aaKnown RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 OXCT1P55809 520 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 RNASE9P60153 205 aaKnown RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 FAM193AP78312 1265 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 BNC1Q01954 994 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 SULT2A1Q06520 285 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 AUHQ13825 339 aaKnown RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 CST6Q15828 149 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 IL27RAQ6UWB1 636 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 MMAAQ8IVH4 418 aaKnown RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 PTPRN2Q92932 1015 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 IGSF8Q969P0 613 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 C18orf8Q96DM3 657 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 PPP1R9BQ96SB3 815 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 FAM129BQ96TA1 746 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 SCNM1Q9BWG6 230 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 NAA15Q9BXJ9 866 aaKnown RBP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 WDCPQ9H6R7 721 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 GAREM1Q9H706 876 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 OSGEPQ9NPF4 335 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.38■□□□□ 0.21
CRLF3-203ENST00000578692 PCDHB9Q9Y5E1 797 aa16.38■□□□□ 0.21
CRLF3-203ENST00000578692 NUMA1Q14980 2115 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 MID1O15344 667 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 PAGE1O75459 146 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 CER1O95813 267 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 SLC8A1P32418 973 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 RDXP35241 583 aaKnown RBP16.37■□□□□ 0.21
CRLF3-203ENST00000578692 GABRB2P47870 512 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 NUMBP49757 651 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 AFF3P51826 1226 aaKnown RBP16.37■□□□□ 0.21
CRLF3-203ENST00000578692 HLA-BQ31612 363 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 TAF3Q5VWG9 929 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 CXorf57Q6NSI4 855 aaKnown RBP16.37■□□□□ 0.21
CRLF3-203ENST00000578692 ERICH1Q86X53 443 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 ENOX1Q8TC92 643 aaKnown RBP16.37■□□□□ 0.21
CRLF3-203ENST00000578692 CAMK1GQ96NX5 476 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 NPY6RQ99463 290 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 OMDQ99983 421 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 STK33Q9BYT3 514 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 SIK2Q9H0K1 926 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 NEUROG2Q9H2A3 272 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 IL21RQ9HBE5 538 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 VANGL2Q9ULK5 521 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 HS3ST4Q9Y661 456 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 SLCO1B1Q9Y6L6 691 aa16.37■□□□□ 0.21
CRLF3-203ENST00000578692 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.36■□□□□ 0.21
CRLF3-203ENST00000578692 A0A1B0GVT2 93 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms