RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 AP4E1Q9UPM8 1137 aa12.75□□□□□ -0.37
RARA-208ENST00000577646 ADGRG1Q9Y653 693 aa12.75□□□□□ -0.37
RARA-208ENST00000577646 CACNA1HO95180 2353 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 ILVBLA1L0T0 632 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 ZNF487B1APH4 448 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 K7EQS6 105 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 KRT86O43790 486 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 SRGAP2O75044 1071 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 PAPSS2O95340 614 aaPredicted RBP12.74□□□□□ -0.37
RARA-208ENST00000577646 CCDC175P0C221 793 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 PABPC1P11940 636 aaKnown RBP12.74□□□□□ -0.37
RARA-208ENST00000577646 CD72P21854 359 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 TCF15Q12870 199 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 MESDQ14696 234 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 PDK2Q15119 407 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 DPYSL2Q16555 572 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 SDE2Q6IQ49 451 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 C14orf80Q86SX3 495 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 C12orf40Q86WS4 652 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 SYCE1Q8N0S2 351 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 CARNMT1Q8N4J0 409 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 LZTR1Q8N653 840 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 FAM71BQ8TC56 605 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 IGSF8Q969P0 613 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 TTC17Q96AE7 1141 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 FOXQ1Q9C009 403 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 ZWILCHQ9H900 591 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
RARA-208ENST00000577646 OSGEPQ9NPF4 335 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 TMEM248Q9NWD8 314 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 ELOVL2Q9NXB9 296 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 DDX56Q9NY93 547 aaKnown RBP12.74□□□□□ -0.37
RARA-208ENST00000577646 PLK2Q9NYY3 685 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 DLGAP2Q9P1A6 1054 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 PCSK1NQ9UHG2 260 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 GGA2Q9UJY4 613 aa12.74□□□□□ -0.37
RARA-208ENST00000577646 H0Y858 1186 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 H3BRJ5 948 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 PI15O43692 258 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 LRIG2O94898 1065 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 EGFP01133 1207 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 PTMAP06454 111 aaKnown RBP12.73□□□□□ -0.37
RARA-208ENST00000577646 POLR2EP19388 210 aaKnown RBP12.73□□□□□ -0.37
RARA-208ENST00000577646 HLA-FP30511 346 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 ARL4AP40617 200 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 YBEYP58557 167 aaPredicted RBP12.73□□□□□ -0.37
RARA-208ENST00000577646 SLC25A11Q02978 314 aaKnown RBP12.73□□□□□ -0.37
RARA-208ENST00000577646 SLC20A2Q08357 652 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 CCDC173Q0VFZ6 552 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 RHOT1Q8IXI2 618 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 CFAP52Q8N1V2 620 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 USP33Q8TEY7 942 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 BHMTQ93088 406 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 LMLNQ96KR4 655 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 SNRNP25Q9BV90 132 aaKnown RBP12.73□□□□□ -0.37
RARA-208ENST00000577646 MAGEH1Q9H213 219 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 DHX35Q9H5Z1 703 aaKnown RBP12.73□□□□□ -0.37
RARA-208ENST00000577646 ABCB8Q9NUT2 735 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 PLA2G4CQ9UP65 541 aa12.73□□□□□ -0.37
RARA-208ENST00000577646 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.73□□□□□ -0.37
RARA-208ENST00000577646 REXO2Q9Y3B8 237 aaKnown RBP12.73□□□□□ -0.37
RARA-208ENST00000577646 MTF2Q9Y483 593 aaPredicted RBP12.73□□□□□ -0.37
RARA-208ENST00000577646 ZFHX2Q9C0A1 2572 aaPredicted RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 DAPK3O43293 454 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 SRPRAP08240 638 aaKnown RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 DLDP09622 509 aaKnown RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 RARAP10276 462 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 EPHB2P29323 1055 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 OR1E1P30953 314 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 HOXA6P31267 233 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 SSR1P43307 286 aaKnown RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 KIR2DL1P43626 348 aaPredicted RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 CCR3P51677 355 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 SGSHP51688 502 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 GEMIN4P57678 1058 aaKnown RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 TPI1P60174 286 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 CCZ1BP86790 482 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 CCZ1P86791 482 aaPredicted RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 KDSRQ06136 332 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 RAB6CQ53S08 254 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 EOGTQ5NDL2 527 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 ARTNQ5T4W7 220 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 CXorf57Q6NSI4 855 aaKnown RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 RWDD4Q6NW29 188 aaKnown RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 CYP4V2Q6ZWL3 525 aaPredicted RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 SYT13Q7L8C5 426 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 METTL3Q86U44 580 aaKnown RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 UMODL1-AS1Q8N2C9 162 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 CAMKK1Q8N5S9 505 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 RTL3Q8N8U3 475 aaKnown RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 DTWD2Q8NBA8 298 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 ACRBPQ8NEB7 543 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 TPCN2Q8NHX9 752 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 KIAA1524Q8TCG1 905 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 BTBD6Q96KE9 485 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 FEM1AQ9BSK4 669 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 C2orf49Q9BVC5 232 aaPredicted RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 FAM126AQ9BYI3 521 aaPredicted RBP12.72□□□□□ -0.37
RARA-208ENST00000577646 RAB6CQ9H0N0 254 aa12.72□□□□□ -0.37
RARA-208ENST00000577646 THAP10Q9P2Z0 257 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms