RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 OR52N4Q8NGI2 321 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 OR1N1Q8NGS0 311 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 CEP70Q8NHQ1 597 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 MPLKIPQ8TAP9 179 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 ARRDC3Q96B67 414 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 PRR11Q96HE9 360 aaPredicted RBP2.8□□□□□ -1.96
COPS3-213ENST00000577210 UBXN10Q96LJ8 280 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 C5orf34Q96MH7 638 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 FCRL5Q96RD9 977 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 CD180Q99467 661 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 MACROD1Q9BQ69 325 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 EFHD1Q9BUP0 239 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 MECRQ9BV79 373 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 TRIM31Q9BZY9 425 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 MAF1Q9H063 256 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 UNC45AQ9H3U1 944 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 TASP1Q9H6P5 420 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 RIC8AQ9NPQ8 531 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 ITM2CQ9NQX7 267 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 PAPOLBQ9NRJ5 636 aaKnown RBP2.8□□□□□ -1.96
COPS3-213ENST00000577210 PDP2Q9P2J9 529 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 ZNF69Q9UC07 566 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 FBXO40Q9UH90 709 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 FEM1BQ9UK73 627 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 B3GNT3Q9Y2A9 372 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 TMEM98Q9Y2Y6 226 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 PCDHA10Q9Y5I2 948 aa2.8□□□□□ -1.96
COPS3-213ENST00000577210 CYP2D7A0A087X1C5 515 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 MANSC4A6NHS7 340 aaPredicted RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 FAM90A20PA6NIJ5 464 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 LRRC3CA6NJW4 275 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 HMGB1P1B2RPK0 211 aaPredicted RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 KCNJ18B7U540 433 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 TISP43B9A030 160 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 M0QZQ0 153 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 NCAM2O15394 837 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 STRNO43815 780 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 HBP1O60381 514 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 ALDOCP09972 364 aaKnown RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 CYP4B1P13584 511 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 PKMP14618 531 aaKnown RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 FBLP22087 321 aaKnown RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 SKIV2L2P42285 1042 aaKnown RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 NANOS3P60323 173 aaKnown RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 ID2Q02363 134 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 TFF2Q03403 129 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 CHRNDQ07001 517 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 CDK18Q07002 472 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 GALNT3Q14435 633 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 TRIP6Q15654 476 aaKnown RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 EZH2Q15910 746 aaKnown RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 GXYLT1Q4G148 440 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 TTC39AQ5SRH9 613 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 ZNF474Q6S9Z5 364 aaPredicted RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 BBS12Q6ZW61 710 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 FAM57BQ71RH2 274 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 LRRC8DQ7L1W4 858 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 RFX6Q8HWS3 928 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 PRSS3P2Q8NHM4 247 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 ZCCHC10Q8TBK6 192 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 CENPIQ92674 756 aaPredicted RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 MAP4K1Q92918 833 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 ZFYVE19Q96K21 471 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 COG8Q96MW5 612 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 GPR78Q96P69 363 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 SH2D3AQ9BRG2 576 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 IFT27Q9BW83 186 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 NPLQ9BXD5 320 aaPredicted RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 CADM1Q9BY67 442 aaKnown RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 R3HDMLQ9H3Y0 253 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 ABHD16BQ9H3Z7 469 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 JMJD4Q9H9V9 463 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 WASH6PQ9NQA3 447 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 PPP1R14DQ9NXH3 145 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 C9orf78Q9NZ63 289 aaPredicted RBP2.79□□□□□ -1.96
COPS3-213ENST00000577210 KCND3Q9UK17 655 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 DHDHQ9UQ10 334 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 DTX4Q9Y2E6 619 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 FER1L4A9Z1Z3 1794 aa2.79□□□□□ -1.96
COPS3-213ENST00000577210 LMTK3Q96Q04 1460 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 GOLGA6L10A0A0M3HER8 536 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 RRN3P2A6NIE6 340 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 AGAP5A6NIR3 686 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 M0QYT0 321 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 GRM8O00222 908 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 HOXC11O43248 304 aaPredicted RBP2.78□□□□□ -1.96
COPS3-213ENST00000577210 MSI1O43347 362 aaKnown RBP2.78□□□□□ -1.96
COPS3-213ENST00000577210 TULP3O75386 442 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 HEXIM1O94992 359 aaKnown RBP2.78□□□□□ -1.96
COPS3-213ENST00000577210 NFATC1O95644 943 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 LATS1O95835 1130 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 CENPBP07199 599 aaPredicted RBP2.78□□□□□ -1.96
COPS3-213ENST00000577210 WEE2P0C1S8 567 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 RFPL3SP0C7P2 107 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 CYP2D6P10635 497 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 RXRAP19793 462 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 EPHB2P29323 1055 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 PGM1P36871 562 aa2.78□□□□□ -1.96
COPS3-213ENST00000577210 CPA2P48052 419 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms