RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 NPIPB5A8MRT5 1133 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 NPIPB4C9JG80 1138 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 ADAM10O14672 748 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 HNRNPRO43390 633 aaKnown RBP5.53□□□□□ -1.52
CDC27-219ENST00000576484 KELP23276 732 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 PRPH2P23942 346 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 PPM1FP49593 454 aaPredicted RBP5.53□□□□□ -1.52
CDC27-219ENST00000576484 BIRC3Q13489 604 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 PGM5Q15124 567 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 SRSF7Q16629 238 aaKnown RBP eCLIP5.53□□□□□ -1.52
CDC27-219ENST00000576484 ANKRD45Q5TZF3 282 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 LIPMQ5VYY2 423 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 ANKS1BQ7Z6G8 1248 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 CPXCR1Q8N123 301 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 PAQR4Q8N4S7 273 aaPredicted RBP5.53□□□□□ -1.52
CDC27-219ENST00000576484 ENDOVQ8N8Q3 282 aaKnown RBP5.53□□□□□ -1.52
CDC27-219ENST00000576484 ARL14EPQ8N8R7 260 aaPredicted RBP5.53□□□□□ -1.52
CDC27-219ENST00000576484 FSIP1Q8NA03 581 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 TXNRD2Q9NNW7 524 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 SLC22A11Q9NSA0 550 aa5.53□□□□□ -1.52
CDC27-219ENST00000576484 LMTK3Q96Q04 1460 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 MCIDASD6RGH6 385 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 STX16-NPEPL1H3BU86 382 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 STX16O14662 325 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 HSD3B1P14060 373 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 TFEBP19484 476 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 HOXD9P28356 352 aaPredicted RBP5.52□□□□□ -1.53
CDC27-219ENST00000576484 CCT5P48643 541 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 ADPRHP54922 357 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 SLC12A2P55011 1212 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 SSBP2P81877 361 aaPredicted RBP5.52□□□□□ -1.53
CDC27-219ENST00000576484 ZNF91Q05481 1191 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 SLC9C1Q4G0N8 1177 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 Q4G0T1 1027 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 ARL13AQ5H913 290 aaPredicted RBP5.52□□□□□ -1.53
CDC27-219ENST00000576484 MTX3Q5HYI7 312 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 EARS2Q5JPH6 523 aaKnown RBP5.52□□□□□ -1.53
CDC27-219ENST00000576484 KIAA1755Q5JYT7 1200 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 ANKRD18AQ8IVF6 992 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 TMEM57Q8N5G2 664 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 LINS1Q8NG48 757 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 KAT2BQ92831 832 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 ZSCAN31Q96LW9 406 aaPredicted RBP5.52□□□□□ -1.53
CDC27-219ENST00000576484 ADAD1Q96M93 576 aaKnown RBP5.52□□□□□ -1.53
CDC27-219ENST00000576484 COG8Q96MW5 612 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 SIGLEC11Q96RL6 698 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 PYM1Q9BRP8 204 aaKnown RBP5.52□□□□□ -1.53
CDC27-219ENST00000576484 SLC29A3Q9BZD2 475 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 NRIP3Q9NQ35 241 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 RASSF1Q9NS23 344 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 FBXO4Q9UKT5 387 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 DERAQ9Y315 318 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 PKP3Q9Y446 797 aa5.52□□□□□ -1.53
CDC27-219ENST00000576484 EIF3FO00303 357 aaPredicted RBP5.51□□□□□ -1.53
CDC27-219ENST00000576484 USP12O75317 370 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 CTSAP10619 480 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 LMO1P25800 156 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 PNPLA4P41247 253 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 PAPOLAP51003 745 aaKnown RBP5.51□□□□□ -1.53
CDC27-219ENST00000576484 RPS13P62277 151 aaKnown RBP5.51□□□□□ -1.53
CDC27-219ENST00000576484 STIM1Q13586 685 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 RAPGEF1Q13905 1077 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 EFR3AQ14156 821 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 IP6K1Q92551 441 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 KCNJ9Q92806 393 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 PIMREGQ9BSJ6 248 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 TMEM184CQ9NVA4 438 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 DNAJC16Q9Y2G8 782 aa5.51□□□□□ -1.53
CDC27-219ENST00000576484 RRP7AQ9Y3A4 280 aaKnown RBP5.51□□□□□ -1.53
CDC27-219ENST00000576484 CXorf65A6NEN9 183 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 SEPT4O43236 478 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 WNT1P04628 370 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 CD63P08962 238 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 CKMT1AP12532 417 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 CPA2P48052 419 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 ZBTB16Q05516 673 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 GXYLT1Q4G148 440 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 MORN5Q5VZ52 161 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 MTFR2Q6P444 385 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 SLC30A9Q6PML9 568 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 RNF144BQ7Z419 303 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 UBE2Q1Q7Z7E8 422 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 TMEM200AQ86VY9 491 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 ZNF354CQ86Y25 554 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 SCN4BQ8IWT1 228 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 ADGRF4Q8IZF3 695 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 VPS52Q8N1B4 723 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 FAM47BQ8NA70 645 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 FAM110DQ8TAY7 271 aaPredicted RBP5.5□□□□□ -1.53
CDC27-219ENST00000576484 BCAS4Q8TDM0 211 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 KAT2AQ92830 837 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 CUL5Q93034 780 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 RBM17Q96I25 401 aaKnown RBP5.5□□□□□ -1.53
CDC27-219ENST00000576484 UBXN10Q96LJ8 280 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 ARL15Q9NXU5 204 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 RRN3Q9NYV6 651 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 PI4KBQ9UBF8 816 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 SLC8A2Q9UPR5 921 aa5.5□□□□□ -1.53
CDC27-219ENST00000576484 ZNF804BA4D1E1 1349 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms