RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 JAK1P23458 1154 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 CRABP2P29373 138 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 GRIA4P48058 902 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 BCAT1P54687 386 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 POU6F1Q14863 301 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 ITFG2Q969R8 447 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 AP5M1Q9H0R1 490 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 SPAG4Q9NPE6 437 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 DMAC2Q9NW81 257 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 SPATA31A1Q5TZJ5 1347 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 A0A0A0MRY4 1105 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 EVPLLA8MZ36 301 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 HBP1O60381 514 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 MFN2O95140 757 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 VAPBO95292 243 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 NPY2RP49146 381 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 PLK1P53350 603 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 SNX17Q15036 470 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 TLDC1Q6P9B6 456 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 UNC5AQ6ZN44 842 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 SCUBE3Q8IX30 993 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 KBTBD2Q8IY47 623 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 TAGAPQ8N103 731 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 MYO1HQ8N1T3 1032 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 SFRP1Q8N474 314 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 SPATA13Q96N96 652 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 ACE2Q9BYF1 805 aaPredicted RBP13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 WDCPQ9H6R7 721 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 POMPQ9Y244 141 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 PCDHA2Q9Y5H9 948 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 LINC00854A0A1B0GVQ3 168 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZNF143P52747 638 aaPredicted RBP13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 PACS1Q6VY07 963 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZPBP2Q6X784 338 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 ABHD8Q96I13 439 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 SERAC1Q96JX3 654 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 TCF12Q99081 682 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 RAD21L1Q9H4I0 556 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 ADAM28Q9UKQ2 775 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 PCDHGB4Q9UN71 923 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 H3BNX3 289 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 SNRPB2P08579 225 aaKnown RBP13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 SNHG28P0DPA3 235 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 CDKN2BP42772 138 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 DEPDC1Q5TB30 811 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 OLFML1Q6UWY5 402 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 MON1BQ7L1V2 547 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZFPM1Q8IX07 1006 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 LRRC15Q8TF66 581 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 PPP1R10Q96QC0 940 aaKnown RBP13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZNF556Q9HAH1 456 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 PREBQ9HCU5 417 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 COMMD8Q9NX08 183 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 AFF4Q9UHB7 1163 aaKnown RBP13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 DOLKQ9UPQ8 538 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 SQORQ9Y6N5 450 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 NCAM2O15394 837 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 MYO1DO94832 1006 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 HLA-DPA1P20036 260 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 UBE3AQ05086 875 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 CACNB2Q08289 660 aaPredicted RBP13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 CENPLQ8N0S6 344 aaPredicted RBP13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 POMKQ9H5K3 350 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 WDR55Q9H6Y2 383 aaPredicted RBP13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 DNAAF2Q9NVR5 837 aaKnown RBP13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 PIN4Q9Y237 131 aaKnown RBP13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 CHD2O14647 1828 aaKnown RBP13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 TMEM247A6NEH6 219 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZNF862O60290 1169 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 SGO1Q5FBB7 561 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 MRNIPQ6NTE8 343 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 TTC30AQ86WT1 665 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 MIER2Q8N344 545 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZNF280CQ8ND82 737 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 SH3GL1Q99961 368 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 FICDQ9BVA6 458 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 TRIM54Q9BYV2 358 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 EURLQ9NYK6 297 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 FETUBQ9UGM5 382 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 ANAPC2Q9UJX6 822 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 RNF112Q9ULX5 631 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 SLC8A2Q9UPR5 921 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZSCAN9O15535 394 aaPredicted RBP13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 MPP2Q14168 576 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 BROXQ5VW32 411 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 VPS33AQ96AX1 596 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 CEP44Q9C0F1 390 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 PIDD1Q9HB75 910 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 TEKT2Q9UIF3 430 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 PPM1HQ9ULR3 514 aa13.37□□□□□ -0.27
PCDHGB3-201ENST00000576222 RXRBP28702 533 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 CLCN3P51790 818 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 CSTF3Q12996 717 aaKnown RBP13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 MSLNQ13421 630 aaPredicted RBP13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 DPYSQ14117 519 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 TRIM25Q14258 630 aaKnown RBP13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 APOBEC3HQ6NTF7 200 aaKnown RBP13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 DRICH1Q6PGQ1 229 aaPredicted RBP13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 ZDHHC13Q8IUH4 622 aa13.36□□□□□ -0.27
PCDHGB3-201ENST00000576222 DSELQ8IZU8 1212 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms