RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 FIBINQ8TAL6 211 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 KRT35Q92764 455 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 HES6Q96HZ4 224 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 RBM41Q96IZ5 413 aaKnown RBP17.59■□□□□ 0.41
NUP88-210ENST00000574867 CSPG4P5Q96PW8 444 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 CALN1Q9BXU9 219 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 CA14Q9ULX7 337 aa17.59■□□□□ 0.41
NUP88-210ENST00000574867 MIA3Q5JRA6 1907 aa17.58■□□□□ 0.41
NUP88-210ENST00000574867 WASH4PA8MWX3 477 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 CNTN5O94779 1100 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 KDELR1P24390 212 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 MARCKSL1P49006 195 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 RWDD2BP57060 319 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 DPYSQ14117 519 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 C6orf118Q5T5N4 469 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 GRAMD4Q6IC98 578 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 NLRP14Q86W24 1093 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 RTL3Q8N8U3 475 aaKnown RBP17.58■□□□□ 0.4
NUP88-210ENST00000574867 EXD1Q8NHP7 514 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 P2RY13Q9BPV8 354 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 ZNF212Q9UDV6 495 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 TBC1D30Q9Y2I9 924 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 SLC27A6Q9Y2P4 619 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 NCOR1O75376 2440 aa17.58■□□□□ 0.4
NUP88-210ENST00000574867 MEI1Q5TIA1 1274 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 TFAP2DQ7Z6R9 452 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 RCOR2Q8IZ40 523 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 RAPGEF5Q92565 580 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 FAF2Q96CS3 445 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 PNKPQ96T60 521 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 ZRANB2O95218 330 aaKnown RBP eCLIP17.57■□□□□ 0.4
NUP88-210ENST00000574867 CD48P09326 243 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 ALADP13716 330 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 OR1E1P30953 314 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 PEX5P50542 639 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 SIGLEC14Q08ET2 396 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 SLC12A1Q13621 1099 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 ZNF852Q6ZMS4 543 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.57■□□□□ 0.4
NUP88-210ENST00000574867 EDAQ92838 391 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 PRDM16Q9HAZ2 1276 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 ARHGEF4Q9NR80 690 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 CLEC4EQ9ULY5 219 aa17.57■□□□□ 0.4
NUP88-210ENST00000574867 PACSIN2Q9UNF0 486 aaPredicted RBP17.57■□□□□ 0.4
NUP88-210ENST00000574867 C3orf70A6NLC5 250 aaPredicted RBP17.56■□□□□ 0.4
NUP88-210ENST00000574867 RHOCP08134 193 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 ERCC2P18074 760 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 COPS2P61201 443 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 ZNF569Q5MCW4 686 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 IER5LQ5T953 404 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 CXorf57Q6NSI4 855 aaKnown RBP17.56■□□□□ 0.4
NUP88-210ENST00000574867 TXNDC11Q6PKC3 985 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 ZNF783Q6ZMS7 281 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 NUDT18Q6ZVK8 323 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 ANKS1BQ7Z6G8 1248 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 SIX5Q8N196 739 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 PHTF2Q8N3S3 785 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 TERB1Q8NA31 727 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 WFDC5Q8TCV5 224 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 FAM3CQ92520 227 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 KIAA1522Q9P206 1035 aaPredicted RBP17.56■□□□□ 0.4
NUP88-210ENST00000574867 MRPS17Q9Y2R5 130 aaKnown RBP17.56■□□□□ 0.4
NUP88-210ENST00000574867 JRKLQ9Y4A0 524 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 PI4K2BG5E9Z4 385 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 DDX3YO15523 660 aaKnown RBP17.56■□□□□ 0.4
NUP88-210ENST00000574867 CISD3P0C7P0 127 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 IL4RP24394 825 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 HLA-FP30511 346 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 CETN2P41208 172 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 GRIA2P42262 883 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 SLC6A11P48066 632 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 STARD6P59095 220 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 KDSRQ06136 332 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 RPS6KA1Q15418 735 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 ANKRD20A8PQ5CZ79 823 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 CCDC50Q8IVM0 306 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 WFIKKN2Q8TEU8 576 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 ALG3Q92685 438 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 RNF25Q96BH1 459 aaPredicted RBP17.56■□□□□ 0.4
NUP88-210ENST00000574867 ABCB8Q9NUT2 735 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 GGA2Q9UJY4 613 aa17.56■□□□□ 0.4
NUP88-210ENST00000574867 KRBA1A5PL33 1030 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 DCLK1O15075 740 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 APODP05090 189 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 PABPC1P11940 636 aaKnown RBP17.55■□□□□ 0.4
NUP88-210ENST00000574867 SERPINB6P35237 376 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 ETFBP38117 255 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 CDKN2BP42772 138 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 GRSF1Q12849 480 aaKnown RBP eCLIP17.55■□□□□ 0.4
NUP88-210ENST00000574867 LMAN2Q12907 356 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 MMRN1Q13201 1228 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 DMC1Q14565 340 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 PPP2R5EQ16537 467 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 TAZQ16635 292 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 TFDP3Q5H9I0 405 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 TMEM196Q5HYL7 178 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 TMCO3Q6UWJ1 677 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 AHI1Q8N157 1196 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 LZTR1Q8N653 840 aa17.55■□□□□ 0.4
NUP88-210ENST00000574867 ILVBLA1L0T0 632 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms