RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 N4BP2L1Q5TBK1 243 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 SH3PXD2AQ5TCZ1 1133 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 NAA35Q5VZE5 725 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 ZNF776Q68DI1 518 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 FBXL22Q6P050 247 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 XYLT1Q86Y38 959 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 HDDC3Q8N4P3 179 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 ZCCHC9Q8N567 271 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 CADM4Q8NFZ8 388 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 EPS8L1Q8TE68 723 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 RPL10LQ96L21 214 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 MRGPRX3Q96LB0 322 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 SPAG5Q96R06 1193 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 PRMT1Q99873 361 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 WDCPQ9H6R7 721 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 FBRSQ9HAH7 460 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 PIGVQ9NUD9 493 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 RRN3Q9NYV6 651 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 LIMA1Q9UHB6 759 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 HS3ST4Q9Y661 456 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 NUP205Q92621 2012 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 CACNA1AO00555 2505 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 SDK1Q7Z5N4 2213 aa13.11□□□□□ -0.31
NPLOC4-213ENST00000573519 MYO18AQ92614 2054 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 A0A1B0GVM2 712 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 TCAF2A6NFQ2 919 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 TTC34A8MYJ7 566 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 ARHGAP33O14559 1287 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 RNASEH1O60930 286 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 SIN3BO75182 1162 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 PAGE1O75459 146 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 IGLV3-19P01714 112 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 SRPRAP08240 638 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 SYPP08247 313 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 TFE3P19532 575 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 MZF1P28698 734 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 ACSL1P33121 698 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 SOX5P35711 763 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 GABRB2P47870 512 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 STK19P49842 368 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 ECT2LQ008S8 904 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 UBXN1Q04323 297 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 DEUP1Q05D60 604 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 MTA1Q13330 715 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 AUHQ13825 339 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 SYCP1Q15431 976 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 HNRNPA1L2Q32P51 320 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 TTC31Q49AM3 519 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 OTUD1Q5VV17 481 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 MINDY1Q8N5J2 469 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 NEK11Q8NG66 645 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 OR2I1PQ8NGU4 316 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 SLC20A1Q8WUM9 679 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 IGSF8Q969P0 613 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 MYO19Q96H55 970 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 TBCBQ99426 244 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 NPY6RQ99463 290 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 BTBD1Q9H0C5 482 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 TKTL2Q9H0I9 626 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 CAPN10Q9HC96 672 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 EIF2B4Q9UI10 523 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 NCKAP1Q9Y2A7 1128 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 SIK3Q9Y2K2 1263 aa13.1□□□□□ -0.31
NPLOC4-213ENST00000573519 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 SYCE3A1L190 88 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 LGALS16A8MUM7 142 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 METTL12A8MUP2 240 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 GIPC1O14908 333 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 OPHN1O60890 802 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 ADCY5O95622 1261 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 SEMA4FO95754 770 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 NNMTP40261 264 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 STAT1P42224 750 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 IRAK1P51617 712 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 NOMO3P69849 1222 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 ZBTB16Q05516 673 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 ZNF177Q13360 481 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 SLC12A1Q13621 1099 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 KLHL40Q2TBA0 621 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 LRSAM1Q6UWE0 723 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 APTXQ7Z2E3 356 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 PHLDB2Q86SQ0 1253 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 ZNF677Q86XU0 584 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 MMAAQ8IVH4 418 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 DEFB124Q8NES8 71 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 FUCA2Q9BTY2 467 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 ADAM33Q9BZ11 813 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 NAT10Q9H0A0 1025 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 RSPH9Q9H1X1 276 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 C6orf106Q9H6K1 298 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 SLCO3A1Q9UIG8 710 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 PAXBP1Q9Y5B6 917 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 SNX10Q9Y5X0 201 aa13.09□□□□□ -0.31
NPLOC4-213ENST00000573519 CEP192Q8TEP8 1941 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 EDDM13A0A1B0GTR0 161 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 A0A1B0GTW7 788 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 FAM47DPA6NHR8 397 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 LRRC10BA6NIK2 292 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 BCAT2O15382 392 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms