RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 PMS2CLQ68D20 193 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 KIAA1324Q6UXG2 1013 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 SERPINA13PQ6UXR4 307 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 CACUL1Q86Y37 369 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 TMPRSS6Q8IU80 811 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 MCOLN2Q8IZK6 566 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 CPLX3Q8WVH0 158 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 RPL10LQ96L21 214 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 RPRD1AQ96P16 312 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 XPO4Q9C0E2 1151 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 PRSS16Q9NQE7 514 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 RXFP3Q9NSD7 469 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 SEMA4GQ9NTN9 838 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 MPP6Q9NZW5 540 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 SLCO3A1Q9UIG8 710 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 USP18Q9UMW8 372 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 CYP8B1Q9UNU6 501 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 ERVW-1Q9UQF0 538 aa10.56□□□□□ -0.72
GTF3C1-213ENST00000571886 TYW5A2RUC4 315 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 SIGLEC16A6NMB1 481 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 DRGXA6NNA5 263 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 TTC34A8MYJ7 566 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 FAM72CH0Y354 149 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 NPC1O15118 1278 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 ATMINO43313 823 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 GDF9O60383 454 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 PLEKP08567 350 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 RDXP35241 583 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 PRKCIP41743 596 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 PTGER3P43115 390 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 STK19P49842 368 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 HDAC4P56524 1084 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 TPM4P67936 248 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 C1QBPQ07021 282 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 CAMK2GQ13555 558 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 PLEKHG6Q3KR16 790 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 FIGNQ5HY92 759 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 PLA2G2CQ5R387 149 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 FAM72AQ5TYM5 149 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 HGSNATQ68CP4 663 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 TCEAL6Q6IPX3 200 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 FAM72DQ6L9T8 149 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 LRSAM1Q6UWE0 723 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 ARMCX6Q7L4S7 300 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 FAM72BQ86X60 149 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 CCDC185Q8N715 623 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 RNF214Q8ND24 703 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 C3orf20Q8ND61 904 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 CENPIQ92674 756 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 TCEAL3Q969E4 200 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 RMDN1Q96DB5 314 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 LOXL4Q96JB6 756 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 C1orf74Q96LT6 269 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 SELENOOQ9BVL4 669 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 EDEM3Q9BZQ6 932 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 TSPY26PQ9H489 355 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 PRDM16Q9HAZ2 1276 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 TMEM74BQ9NUR3 256 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 PLA2G4CQ9UP65 541 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 OR51B4Q9Y5P0 310 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 DMXL1Q9Y485 3027 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 PI4KAP42356 2102 aa10.55□□□□□ -0.72
GTF3C1-213ENST00000571886 IGLV3-10A0A075B6K4 115 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 A0A1B0GVM2 712 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 BCLAF3A2AJT9 711 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 TCAF2A6NFQ2 919 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 PATE3B3GLJ2 98 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 E9PAM4 449 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 AP5Z1O43299 807 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 CCP110O43303 1012 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 SYNCRIPO60506 623 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 SRGAP2O75044 1071 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 RHOBTB1O94844 696 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 CAVIN2O95810 425 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 FTLP02792 175 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 GYPCP04921 128 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 CALB1P05937 261 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 ATP5BP06576 529 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 CCDC172P0C7W6 258 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 VAV1P15498 845 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 GPD1P21695 349 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 SDC4P31431 198 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 ADRA1BP35368 520 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 MPLP40238 635 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 PTPN9P43378 593 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 DHPSP49366 369 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 PLK1P53350 603 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 CREB5Q02930 508 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 KLHL30Q0D2K2 578 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 STARD3Q14849 445 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 CSRP2Q16527 193 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 RABGAP1LQ5R372 815 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 C9orf64Q5T6V5 341 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 RNF219Q5W0B1 726 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 PRR23CQ6ZRP0 262 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 SND1Q7KZF4 910 aaKnown RBP eCLIP10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 SLC41A1Q8IVJ1 513 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 OR2T3Q8NH03 318 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 FAM172AQ8WUF8 416 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 MCEEQ96PE7 176 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms