RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MUSKO15146 869 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 OGTO15294 1046 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 PRICKLE3O43900 615 aaPredicted RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 CLSTN1O94985 981 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 JMJD7P0C870 316 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 MAPTP10636 758 aaKnown RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 ALPPL2P10696 532 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 DNAJA1P31689 397 aaKnown RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 LHX1P48742 406 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 CCR5P51681 352 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 NEK4P51957 841 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 MAPK10P53779 464 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 PPP2CBP62714 309 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 PPP2CAP67775 309 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 SFSWAPQ12872 951 aaKnown RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 FNDC3BQ53EP0 1204 aaKnown RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 ATP1A1-AS1Q5TC04 95 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 ZNF776Q68DI1 518 aaPredicted RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 TAOK1Q7L7X3 1001 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 ANKS1BQ7Z6G8 1248 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 CCDC83Q8IWF9 413 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 TMEM86AQ8N2M4 240 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 GLIS1Q8NBF1 620 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 TMEM161BQ8NDZ6 487 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 PDZD8Q8NEN9 1154 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 OR2T34Q8NGX1 318 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 ERMNQ8TAM6 284 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 CYB5D2Q8WUJ1 264 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 APOBEC4Q8WW27 367 aaKnown RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 NKD1Q969G9 470 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 INTS4Q96HW7 963 aaKnown RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 PIWIL1Q96J94 861 aaKnown RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 PPP1R13BQ96KQ4 1090 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 C8orf48Q96LL4 319 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 DMRTB1Q96MA1 342 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 ZNF560Q96MR9 790 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 CATSPER2Q96P56 530 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 SYT15Q9BQS2 421 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 OCSTAMPQ9BR26 566 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 NTPCRQ9BSD7 190 aaKnown RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 PABPC3Q9H361 631 aaKnown RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 ACBD3Q9H3P7 528 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 USP29Q9HBJ7 922 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 CRTAC1Q9NQ79 661 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 PRSS16Q9NQE7 514 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 LATS2Q9NRM7 1088 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 EVA1BQ9NVM1 165 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 RRN3Q9NYV6 651 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 ARHGAP20Q9P2F6 1191 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 LSM7Q9UK45 103 aaKnown RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 PCDHGA11Q9Y5H2 935 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 PKD1L1Q8TDX9 2849 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 A0A1W2PQ27 194 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 A0A1W2PQ64 194 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 A0A1W2PQC6 194 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 EME2A4GXA9 379 aaPredicted RBP7.22□□□□□ -1.25
CHD3-213ENST00000571249 TMEM200CA6NKL6 621 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 GABRDO14764 452 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 SCAMP1O15126 338 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 TIMM44O43615 452 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 NEMFO60524 1076 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 CNTN5O94779 1100 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 TBX18O95935 607 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 PENKP01210 267 aaPredicted RBP7.22□□□□□ -1.25
CHD3-213ENST00000571249 BRD2P25440 801 aaKnown RBP7.22□□□□□ -1.25
CHD3-213ENST00000571249 LMO2P25791 158 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 OAS2P29728 719 aaKnown RBP7.22□□□□□ -1.25
CHD3-213ENST00000571249 PDIA3P30101 505 aaKnown RBP7.22□□□□□ -1.25
CHD3-213ENST00000571249 CDC25AP30304 524 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 MAT2AP31153 395 aaKnown RBP7.22□□□□□ -1.25
CHD3-213ENST00000571249 PNPLA4P41247 253 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 TRAPPC10P48553 1259 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 HARS2P49590 506 aaKnown RBP7.22□□□□□ -1.25
CHD3-213ENST00000571249 PGFP49763 221 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 LIG4P49917 911 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 CACNA2D1P54289 1103 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 EHHADHQ08426 723 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 MAPK7Q13164 816 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 SPIDRQ14159 915 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 DHX8Q14562 1220 aaKnown RBP7.22□□□□□ -1.25
CHD3-213ENST00000571249 EIF4HQ15056 248 aaKnown RBP7.22□□□□□ -1.25
CHD3-213ENST00000571249 INPP5JQ15735 1006 aaPredicted RBP7.22□□□□□ -1.25
CHD3-213ENST00000571249 NADK2Q4G0N4 442 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 FYB2Q5VWT5 728 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 SCARA3Q6AZY7 606 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 NAPEPLDQ6IQ20 393 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 TCTN3Q6NUS6 607 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 BRICD5Q6PL45 260 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 BLOC1S3Q6QNY0 202 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 CAPN12Q6ZSI9 719 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 USP30Q70CQ3 517 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 GDF7Q7Z4P5 450 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 DSG4Q86SJ6 1040 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 IQCHQ86VS3 1027 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 GOLGA1Q92805 767 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 PCED1BQ96HM7 432 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 MSTO1Q9BUK6 570 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 PRR14Q9BWN1 585 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 KLF16Q9BXK1 252 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms