RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 C3orf62Q6ZUJ4 267 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 MON1AQ86VX9 555 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 C2orf15Q8WU43 125 aaKnown RBP17.82■□□□□ 0.44
RPAIN-208ENST00000571043 MAML1Q92585 1016 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 RNF34Q969K3 372 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 HAPLN3Q96S86 360 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 LGMNQ99538 433 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 EMILIN2Q9BXX0 1053 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 IL37Q9NZH6 218 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 CTNNAL1Q9UBT7 734 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 RABGEF1Q9UJ41 708 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 TEX264Q9Y6I9 313 aa17.82■□□□□ 0.44
RPAIN-208ENST00000571043 MTMR11A4FU01 709 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 VNN2O95498 520 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 METTL18O95568 372 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 CHN1P15882 459 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 MX2P20592 715 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 ANKRD20A2Q5SQ80 823 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 ANKRD20A1Q5TYW2 823 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 ANKRD20A3Q5VUR7 823 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 MDM1Q8TC05 714 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 SPPL2BQ8TCT7 592 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 GDPD5Q8WTR4 605 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 P2RY11Q96G91 374 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 XPO6Q96QU8 1125 aaKnown RBP17.81■□□□□ 0.44
RPAIN-208ENST00000571043 PRDM12Q9H4Q4 367 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 ACSS3Q9H6R3 686 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 OR12D3Q9UGF7 316 aa17.81■□□□□ 0.44
RPAIN-208ENST00000571043 AFF4Q9UHB7 1163 aaKnown RBP17.81■□□□□ 0.44
RPAIN-208ENST00000571043 RFXAPO00287 272 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 C1RP00736 705 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 ADH1AP07327 375 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 APRTP07741 180 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 CCR1P32246 355 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 SERPINB6P35237 376 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 ELK3P41970 407 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 MAGEA3P43357 314 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 GEMIN4P57678 1058 aaKnown RBP17.8■□□□□ 0.44
RPAIN-208ENST00000571043 AP1B1Q10567 949 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 PPP2R5DQ14738 602 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 LILRA6Q6PI73 481 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 CAND1Q86VP6 1230 aaKnown RBP17.8■□□□□ 0.44
RPAIN-208ENST00000571043 CYP4X1Q8N118 509 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 ATAD1Q8NBU5 361 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 LRRN4Q8WUT4 740 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 PGLYRP2Q96PD5 576 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 XAB2Q9HCS7 855 aaKnown RBP17.8■□□□□ 0.44
RPAIN-208ENST00000571043 EIF2B3Q9NR50 452 aaKnown RBP17.8■□□□□ 0.44
RPAIN-208ENST00000571043 COMMD8Q9NX08 183 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 SENP1Q9P0U3 644 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 HSFX1Q9UBD0 423 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 MAFFQ9ULX9 164 aa17.8■□□□□ 0.44
RPAIN-208ENST00000571043 PRRC2BQ5JSZ5 2229 aaKnown RBP17.8■□□□□ 0.44
RPAIN-208ENST00000571043 A0A1W2PQH9 124 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 GMNCA6NCL1 334 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 POC1B-GALNT4F8VUJ3 575 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 RNF103O00237 685 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 MTSS1O43312 755 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 LRIG2O94898 1065 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 GSTA2P09210 222 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 SSTR1P30872 391 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 CA8P35219 290 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 SARNPP82979 210 aaKnown RBP17.79■□□□□ 0.44
RPAIN-208ENST00000571043 IFRD2Q12894 506 aaPredicted RBP17.79■□□□□ 0.44
RPAIN-208ENST00000571043 DDR2Q16832 855 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 PARP6Q2NL67 630 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 FAXCQ5TGI0 409 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 MSANTD2Q6P1R3 559 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 NLRP14Q86W24 1093 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 CCDC33Q8N5R6 958 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 CCNYQ8ND76 341 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 SERPINB11Q96P15 392 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 DHRS4Q9BTZ2 278 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 TTYH1Q9H313 450 aaPredicted RBP17.79■□□□□ 0.44
RPAIN-208ENST00000571043 CCDC134Q9H6E4 229 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 NMUR1Q9HB89 426 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 INTS9Q9NV88 658 aaKnown RBP17.79■□□□□ 0.44
RPAIN-208ENST00000571043 PSMC3IPQ9P2W1 217 aaPredicted RBP17.79■□□□□ 0.44
RPAIN-208ENST00000571043 CHMP2BQ9UQN3 213 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 PLXNA3P51805 1871 aa17.79■□□□□ 0.44
RPAIN-208ENST00000571043 FAM92AA1XBS5 289 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 NDUFAB1O14561 156 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 FAM107AO95990 144 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 MLNP12872 115 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 EPHB2P29323 1055 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 HOXC13P31276 330 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 PPIDQ08752 370 aaKnown RBP17.78■□□□□ 0.44
RPAIN-208ENST00000571043 GALNT2Q10471 571 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 WASHC5Q12768 1159 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 DUSP4Q13115 394 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 TMED2Q15363 201 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 CAPN12Q6ZSI9 719 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 FBF1Q8TES7 1133 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 ATXN2LQ8WWM7 1075 aaKnown RBP17.78■□□□□ 0.44
RPAIN-208ENST00000571043 CASP10Q92851 521 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 HDAC11Q96DB2 347 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 MRPL38Q96DV4 380 aaKnown RBP17.78■□□□□ 0.44
RPAIN-208ENST00000571043 CYTH2Q99418 400 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 CRISPLD1Q9H336 500 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 PPANQ9NQ55 473 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms