RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	VAV2	P52735	878 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	KRT83	P78385	493 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	LMAN2	Q12907	356 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	MTAP	Q13126	283 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ZNF177	Q13360	481 aa	Predicted RBP	11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	NUMA1	Q14980	2115 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TCEAL1	Q15170	157 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CA9	Q16790	459 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	SMTNL2	Q2TAL5	461 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	FSCB	Q5H9T9	825 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ARTN	Q5T4W7	220 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	EMC10	Q5UCC4	262 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	MANEAL	Q5VSG8	457 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	RWDD4	Q6NW29	188 aa	Known RBP	11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PKN3	Q6P5Z2	889 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TFAP2D	Q7Z6R9	452 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CPNE8	Q86YQ8	564 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ABCA7	Q8IZY2	2146 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	AHI1	Q8N157	1196 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	DTWD2	Q8NBA8	298 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	WFIKKN2	Q8TEU8	576 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	USP33	Q8TEY7	942 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	HSPH1	Q92598	858 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	EPAS1	Q99814	870 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CIPC	Q9C0C6	399 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ZYG11B	Q9C0D3	744 aa		11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	DHX35	Q9H5Z1	703 aa	Known RBP	11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.91	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PI4KA	P42356	2102 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845		A0A0A6YYK5	440 aa	Predicted RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ARHGAP6	O43182	974 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	NRDC	O43847	1150 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	MOCS3	O95396	460 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	KLF8	O95600	359 aa	Predicted RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	IL1R2	P27930	398 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	KIR2DL1	P43626	348 aa	Predicted RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	NUMB	P49757	651 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	HADHB	P55084	474 aa	Known RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TPI1	P60174	286 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	MRPS21	P82921	87 aa	Known RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	SLC25A11	Q02978	314 aa	Known RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	GAS6	Q14393	721 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	HADH	Q16836	314 aa	Known RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	FUT11	Q495W5	492 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	KCNT1	Q5JUK3	1230 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	EGFLAM	Q63HQ2	1017 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TMEM215	Q68D42	235 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CXorf57	Q6NSI4	855 aa	Known RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	PSTK	Q8IV42	348 aa	Known RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TXLNB	Q8N3L3	684 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	SPEM1	Q8N4L4	309 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	UCMA	Q8WVF2	138 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	TEKT4	Q8WW24	435 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	LMLN	Q96KR4	655 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	KCTD15	Q96SI1	283 aa	Predicted RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	IER2	Q9BTL4	223 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	ZDHHC4	Q9NPG8	344 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	NEU3	Q9UQ49	428 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	VPS13A	Q96RL7	3174 aa		11.9	□□□□□ -0.5
ATP2A3-208	ENST00000570845	CHURC1-FNTB	B4DL54	471 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	EEF2K	O00418	725 aa	Known RBP	11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	PJA2	O43164	708 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	BUB1	O43683	1085 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	ATG13	O75143	517 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	PTMA	P06454	111 aa	Known RBP	11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	RHOC	P08134	193 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	RARA	P10276	462 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	RHOQ	P17081	205 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	POLR2E	P19388	210 aa	Known RBP	11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	MZF1	P28698	734 aa	Predicted RBP	11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	EPHB2	P29323	1055 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	OR1E1	P30953	314 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	CSK	P41240	450 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	OXCT1	P55809	520 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	CCZ1B	P86790	482 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	CCZ1	P86791	482 aa	Predicted RBP	11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	SEMA3B	Q13214	749 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	SLC12A1	Q13621	1099 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	EIF4H	Q15056	248 aa	Known RBP	11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	BOLA3	Q53S33	107 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	PITRM1	Q5JRX3	1037 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	C6orf118	Q5T5N4	469 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	RNF219	Q5W0B1	726 aa	Predicted RBP	11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	MBLAC2	Q68D91	279 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	TXNRD3NB	Q6F5E7	133 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	SETD3	Q86TU7	594 aa	Predicted RBP	11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	ADIPOR2	Q86V24	386 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	APCDD1	Q8J025	514 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	CCDC33	Q8N5R6	958 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	ALLC	Q8N6M5	410 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	TXNDC5	Q8NBS9	432 aa	Known RBP	11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	OR52K2	Q8NGK3	314 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	SORCS1	Q8WY21	1168 aa		11.89	□□□□□ -0.51
ATP2A3-208	ENST00000570845	ACD	Q96AP0	544 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms