RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ATXN3P54252 364 aaPredicted RBP17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ECT2LQ008S8 904 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 SFSWAPQ12872 951 aaKnown RBP17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 RAPGEF1Q13905 1077 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 BRMS1LQ5PSV4 323 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 DCAF12L1Q5VU92 463 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 OTUD1Q5VV17 481 aaPredicted RBP17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 FBXL22Q6P050 247 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CCAR2Q8N163 923 aaKnown RBP17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 MINDY1Q8N5J2 469 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ZNF366Q8N895 744 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 GPT2Q8TD30 523 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CNTNAP3BQ96NU0 1288 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 PPP1R9BQ96SB3 815 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CNTNAP3Q9BZ76 1288 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 GANQ9H2C0 597 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 SGK2Q9HBY8 427 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 WASF3Q9UPY6 502 aa17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 KMT2BQ9UMN6 2715 aaPredicted RBP17.64■□□□□ 0.41
MAP1LC3B-208ENST00000570189 EDDM13A0A1B0GTR0 161 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 GIPC1O14908 333 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 DNTTP04053 509 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ZNF883P0CG24 379 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 MAPK8P45983 427 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CXCR3P49682 368 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 HNRNPDQ14103 355 aaKnown RBP17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 HSP90AA4PQ58FG1 418 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 C9orf64Q5T6V5 341 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CXorf57Q6NSI4 855 aaKnown RBP17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 BNIPLQ7Z465 357 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 HDDC3Q8N4P3 179 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 EPS8L1Q8TE68 723 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 C18orf8Q96DM3 657 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 BTBD1Q9H0C5 482 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 SLC32A1Q9H598 525 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 SYNCQ9H7C4 482 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ARHGEF38Q9NXL2 777 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ADAMTS1Q9UHI8 967 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 STAP1Q9ULZ2 295 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 PAXBP1Q9Y5B6 917 aa17.63■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CHD5Q8TDI0 1954 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 BCAT2O15382 392 aaPredicted RBP17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 SIN3BO75182 1162 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 GRAP2O75791 330 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 F9P00740 461 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ACSL1P33121 698 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ZNF252P-AS1Q0IIN9 211 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 AUHQ13825 339 aaKnown RBP17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 KRT31Q15323 416 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 UAP1L1Q3KQV9 507 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 MMS22LQ6ZRQ5 1243 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 XYLT1Q86Y38 959 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 MSANTD4Q8NCY6 345 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ALG14Q96F25 216 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ADAM33Q9BZ11 813 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 PABPC3Q9H361 631 aaKnown RBP17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 FZD4Q9ULV1 537 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 TBC1D30Q9Y2I9 924 aa17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 MAP1BP46821 2468 aaKnown RBP17.62■□□□□ 0.41
MAP1LC3B-208ENST00000570189 PLXNA2O75051 1894 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 TMEM131Q92545 1883 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 M0QYT0 321 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 RNASEH1O60930 286 aaKnown RBP17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 PAGE1O75459 146 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CLDN11O75508 207 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 SEMA4FO95754 770 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CD59P13987 128 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 MAOBP27338 520 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CTSOP43234 321 aaPredicted RBP17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 JAM2P57087 298 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 NOMO3P69849 1222 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 GRIK2Q13002 908 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 SLC25A52Q3SY17 297 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 IL27RAQ6UWB1 636 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 NOP9Q86U38 636 aaKnown RBP17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ERICH1Q86X53 443 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 APCDD1Q8J025 514 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ZCCHC9Q8N567 271 aaKnown RBP17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 RNF34Q969K3 372 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 IGSF8Q969P0 613 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 FAM131CQ96AQ9 280 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 C1orf74Q96LT6 269 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 GTPBP2Q9BX10 602 aaKnown RBP17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 C6orf106Q9H6K1 298 aaPredicted RBP17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 FSCN3Q9NQT6 498 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 PIGVQ9NUD9 493 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 TAB2Q9NYJ8 693 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 NOCTQ9UK39 431 aaKnown RBP17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 TPX2Q9ULW0 747 aaKnown RBP17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 OR51B4Q9Y5P0 310 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 HS3ST4Q9Y661 456 aa17.61■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CEP295Q9C0D2 2601 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 LRRC10BA6NIK2 292 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 PES1O00541 588 aaKnown RBP17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CYP1A1P04798 512 aaPredicted RBP17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 TPM2P07951 284 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 NNMTP40261 264 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CDH4P55283 916 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms