RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 CHST9Q7L1S5 443 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 ZNF572Q7Z3I7 529 aaPredicted RBP12.86□□□□□ -0.35
EDC3-217ENST00000569606 TFAP2DQ7Z6R9 452 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 TMEM25Q86YD3 366 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 NPWQ8N729 165 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 DEPDC1BQ8WUY9 529 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 IRF7Q92985 503 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 HAUS1Q96CS2 278 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 FAM83CQ9BQN1 747 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 RPP25Q9BUL9 199 aaKnown RBP12.86□□□□□ -0.35
EDC3-217ENST00000569606 KLC2Q9H0B6 622 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 RETREG1Q9H6L5 497 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 PRDM6Q9NQX0 595 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 SPHK2Q9NRA0 654 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 NDFIP2Q9NV92 336 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 THG1LQ9NWX6 298 aaKnown RBP12.86□□□□□ -0.35
EDC3-217ENST00000569606 SAE1Q9UBE0 346 aaPredicted RBP12.86□□□□□ -0.35
EDC3-217ENST00000569606 NUMBLQ9Y6R0 609 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 CHD5Q8TDI0 1954 aa12.86□□□□□ -0.35
EDC3-217ENST00000569606 NYNRINQ9P2P1 1898 aaKnown RBP12.85□□□□□ -0.35
EDC3-217ENST00000569606 TYW5A2RUC4 315 aaKnown RBP12.85□□□□□ -0.35
EDC3-217ENST00000569606 KRIT1O00522 736 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 CLDN11O75508 207 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 PENKP01210 267 aaPredicted RBP12.85□□□□□ -0.35
EDC3-217ENST00000569606 PSMC3P17980 439 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 HOXD9P28356 352 aaPredicted RBP12.85□□□□□ -0.35
EDC3-217ENST00000569606 MAPKAPK2P49137 400 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 OTUD4Q01804 1114 aaKnown RBP12.85□□□□□ -0.35
EDC3-217ENST00000569606 GBE1Q04446 702 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 SLC10A2Q12908 348 aaPredicted RBP12.85□□□□□ -0.35
EDC3-217ENST00000569606 NOMO1Q15155 1222 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 PUS10Q3MIT2 529 aaKnown RBP12.85□□□□□ -0.35
EDC3-217ENST00000569606 LY6G5CQ5SRR4 150 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 TRIM68Q6AZZ1 485 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 RHBDF2Q6PJF5 856 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 ARHGAP12Q8IWW6 846 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 TP53INP2Q8IXH6 220 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 LZTR1Q8N653 840 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 PRELID2Q8N945 189 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 TTC13Q8NBP0 860 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 NETO2Q8NC67 525 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 DDI1Q8WTU0 396 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 ZFYVE19Q96K21 471 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 AP1M1Q9BXS5 423 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 NOL6Q9H6R4 1146 aaKnown RBP12.85□□□□□ -0.35
EDC3-217ENST00000569606 DTLQ9NZJ0 730 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 MARK1Q9P0L2 795 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 R3HDM2Q9Y2K5 976 aaKnown RBP12.85□□□□□ -0.35
EDC3-217ENST00000569606 HEY1Q9Y5J3 304 aa12.85□□□□□ -0.35
EDC3-217ENST00000569606 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.84□□□□□ -0.35
EDC3-217ENST00000569606 CHADO15335 359 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 LUC7L3O95232 432 aaKnown RBP12.84□□□□□ -0.35
EDC3-217ENST00000569606 CYBBP04839 570 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 CYP17A1P05093 508 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 IL9P15248 144 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 ARSAP15289 507 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 OR1E1P30953 314 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 SERPINB6P35237 376 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 NR2C2P49116 596 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 ZNF177Q13360 481 aaPredicted RBP12.84□□□□□ -0.35
EDC3-217ENST00000569606 PDGFRLQ15198 375 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 DHCR24Q15392 516 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 CYP1B1Q16678 543 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 AFMIDQ63HM1 303 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 YAF2Q8IY57 180 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 UMODL1-AS1Q8N2C9 162 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 CARNMT1Q8N4J0 409 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 SPATA4Q8NEY3 305 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 OR52K2Q8NGK3 314 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 ACTL9Q8TC94 416 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 C1orf54Q8WWF1 131 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 RSAD2Q8WXG1 361 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 P3H4Q92791 437 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 ATP2A3Q93084 1043 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 BHMTQ93088 406 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 CELF6Q96J87 481 aaKnown RBP12.84□□□□□ -0.35
EDC3-217ENST00000569606 RPGRIP1Q96KN7 1286 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 OLFM3Q96PB7 478 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 FAM118BQ9BPY3 351 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 CARD6Q9BX69 1037 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 BBS2Q9BXC9 721 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 HPS4Q9NQG7 708 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 DONSONQ9NYP3 566 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 PLK2Q9NYY3 685 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 FAM50BQ9Y247 325 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 TBC1D30Q9Y2I9 924 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 NUP205Q92621 2012 aa12.84□□□□□ -0.35
EDC3-217ENST00000569606 COL4A2P08572 1712 aa12.83□□□□□ -0.36
EDC3-217ENST00000569606 NEDD8-MDP1E9PL57 170 aa12.83□□□□□ -0.36
EDC3-217ENST00000569606 MAP3K6O95382 1288 aa12.83□□□□□ -0.36
EDC3-217ENST00000569606 NFATC1O95644 943 aa12.83□□□□□ -0.36
EDC3-217ENST00000569606 TYRP14679 529 aa12.83□□□□□ -0.36
EDC3-217ENST00000569606 GDI1P31150 447 aa12.83□□□□□ -0.36
EDC3-217ENST00000569606 NDST2P52849 883 aa12.83□□□□□ -0.36
EDC3-217ENST00000569606 GALNT2Q10471 571 aa12.83□□□□□ -0.36
EDC3-217ENST00000569606 CCNG2Q16589 344 aa12.83□□□□□ -0.36
EDC3-217ENST00000569606 ANO4Q32M45 955 aa12.83□□□□□ -0.36
EDC3-217ENST00000569606 CXorf57Q6NSI4 855 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms