RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 CCDC15Q0P6D6 951 aa20.89■□□□□ 0.93
SCRT1-201ENST00000569446 TMEM259Q4ZIN3 620 aa20.89■□□□□ 0.93
SCRT1-201ENST00000569446 PLPPR4Q7Z2D5 763 aa20.89■□□□□ 0.93
SCRT1-201ENST00000569446 SHKBP1Q8TBC3 707 aa20.89■□□□□ 0.93
SCRT1-201ENST00000569446 EPAS1Q99814 870 aa20.89■□□□□ 0.93
SCRT1-201ENST00000569446 FRMD8P1Q9BZ68 369 aaPredicted RBP20.89■□□□□ 0.93
SCRT1-201ENST00000569446 C20orf27Q9GZN8 174 aa20.89■□□□□ 0.93
SCRT1-201ENST00000569446 ILKAPQ9H0C8 392 aaPredicted RBP20.89■□□□□ 0.93
SCRT1-201ENST00000569446 COPS7BQ9H9Q2 264 aaPredicted RBP20.89■□□□□ 0.93
SCRT1-201ENST00000569446 GRIK1P39086 918 aa20.89■□□□□ 0.93
SCRT1-201ENST00000569446 CLDN10P78369 228 aa20.89■□□□□ 0.93
SCRT1-201ENST00000569446 NRF1Q16656 503 aa20.89■□□□□ 0.93
SCRT1-201ENST00000569446 LDB1Q86U70 411 aaPredicted RBP20.89■□□□□ 0.93
SCRT1-201ENST00000569446 ZNF781Q8N8C0 355 aa20.89■□□□□ 0.93
SCRT1-201ENST00000569446 MT-CYBP00156 380 aaPredicted RBP20.88■□□□□ 0.93
SCRT1-201ENST00000569446 CHRNGP07510 517 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 PIRTP0C851 137 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 MAXP61244 160 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 LRRC8EQ6NSJ5 796 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 SPON2Q9BUD6 331 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 LRRC40Q9H9A6 602 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 ARHGEF4Q9NR80 690 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 DCDC2Q9UHG0 476 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 MYH9P35579 1960 aaKnown RBP20.88■□□□□ 0.93
SCRT1-201ENST00000569446 ZBTB24O43167 697 aaPredicted RBP20.88■□□□□ 0.93
SCRT1-201ENST00000569446 BNIP3LO60238 219 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 L1CAMP32004 1257 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 BLMHQ13867 455 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 SLC41A1Q8IVJ1 513 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 PHTF2Q8N3S3 785 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 FICDQ9BVA6 458 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 KIAA1257Q9ULG3 409 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 ARHGAP26Q9UNA1 814 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 PRG3Q9Y2Y8 225 aaPredicted RBP20.88■□□□□ 0.93
SCRT1-201ENST00000569446 PCDHA11Q9Y5I1 949 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 SNAPC2Q13487 334 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 KRT80Q6KB66 452 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 DDIASQ8IXT1 998 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 NIPA2Q8N8Q9 360 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 B3GALNT2Q8NCR0 500 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 ABTB1Q969K4 478 aaPredicted RBP20.88■□□□□ 0.93
SCRT1-201ENST00000569446 COG4Q9H9E3 785 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 CCDC167Q9P0B6 97 aa20.88■□□□□ 0.93
SCRT1-201ENST00000569446 ARFGEF1Q9Y6D6 1849 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 SIN3BO75182 1162 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 PPP1R15BQ5SWA1 713 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 LCA5Q86VQ0 697 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 ZNF567Q8N184 647 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 NMRAL1Q9HBL8 299 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 CLIC5Q9NZA1 410 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 RFPL1O75677 317 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 ZBTB46Q86UZ6 589 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 NUP93Q8N1F7 819 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 ATPAF2Q8N5M1 289 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 GPR152Q8TDT2 470 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 EME1Q96AY2 570 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 KANSL3Q9P2N6 904 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 OR12D3Q9UGF7 316 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 SMIM28A0A1B0GU29 152 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 ATG7O95352 703 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 PMLP29590 882 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 TRMT5Q32P41 509 aaKnown RBP20.87■□□□□ 0.93
SCRT1-201ENST00000569446 BTBD8Q5XKL5 378 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 OLFML1Q6UWY5 402 aa20.87■□□□□ 0.93
SCRT1-201ENST00000569446 GBA2Q9HCG7 927 aaPredicted RBP20.87■□□□□ 0.93
SCRT1-201ENST00000569446 ABI2Q9NYB9 513 aaPredicted RBP20.87■□□□□ 0.93
SCRT1-201ENST00000569446 CAPN8A6NHC0 703 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 C2P06681 752 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 FDFT1P37268 417 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 SLC26A2P50443 739 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 MRPS5P82675 430 aaKnown RBP20.86■□□□□ 0.93
SCRT1-201ENST00000569446 ACAP1Q15027 740 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 GNASQ5JWF2 1037 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 PPM1LQ5SGD2 360 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 ANKRD52Q8NB46 1076 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 ZNF670Q9BS34 389 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 CDY2AQ9Y6F7 541 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 CDY1Q9Y6F8 540 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 C10orf71Q711Q0 1435 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 NEMP2A6NFY4 417 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 NCF1BA6NI72 391 aaPredicted RBP20.86■□□□□ 0.93
SCRT1-201ENST00000569446 NCF1CA8MVU1 366 aaPredicted RBP20.86■□□□□ 0.93
SCRT1-201ENST00000569446 TRDMT1O14717 391 aaKnown RBP20.86■□□□□ 0.93
SCRT1-201ENST00000569446 NCF1P14598 390 aaPredicted RBP20.86■□□□□ 0.93
SCRT1-201ENST00000569446 ABCE1P61221 599 aaKnown RBP20.86■□□□□ 0.93
SCRT1-201ENST00000569446 SUDS3Q9H7L9 328 aaPredicted RBP20.86■□□□□ 0.93
SCRT1-201ENST00000569446 DDX18Q9NVP1 670 aaKnown RBP20.86■□□□□ 0.93
SCRT1-201ENST00000569446 SUPT7LO94864 414 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 VAV1P15498 845 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 ACADSP16219 412 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 PEX2P28328 305 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 ZNF470Q6ECI4 717 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 PLD6Q8N2A8 252 aaKnown RBP20.86■□□□□ 0.93
SCRT1-201ENST00000569446 SERPINI1Q99574 410 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 EFR3BQ9Y2G0 817 aa20.86■□□□□ 0.93
SCRT1-201ENST00000569446 TTC24A2A3L6 582 aaPredicted RBP20.85■□□□□ 0.93
SCRT1-201ENST00000569446 MAGEA13PA6NCF6 341 aa20.85■□□□□ 0.93
SCRT1-201ENST00000569446 STX16-NPEPL1H3BU86 382 aa20.85■□□□□ 0.93
SCRT1-201ENST00000569446 TREHO43280 583 aa20.85■□□□□ 0.93
SCRT1-201ENST00000569446 MSI1O43347 362 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms