RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	C10orf76	Q5T2E6	689 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	ARL6IP4	Q66PJ3	421 aa	Known RBP	3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	C11orf96	Q7Z7L8	435 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	MORC1	Q86VD1	984 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	RASGRP3	Q8IV61	690 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	PRR26	Q8N8Z3	221 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	TIFA	Q96CG3	184 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	URB1-AS1	Q96HZ7	61 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	SARG	Q9BW04	601 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	APOL5	Q9BWW9	433 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	DCLK3	Q9C098	648 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	KRCC1	Q9NPI7	259 aa	Predicted RBP	3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	MYO6	Q9UM54	1294 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	NFU1	Q9UMS0	254 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	TNFSF13B	Q9Y275	285 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	DTNA	Q9Y4J8	743 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	NOTCH2	Q04721	2471 aa		3.79	□□□□□ -1.8
UBR1-209	ENST00000569243	HNRNPDL	O14979	420 aa	Known RBP	3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	KIF3B	O15066	747 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	LINC01565	O15544	149 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	SPRY3	O43610	288 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	CAMTA2	O94983	1202 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	NFATC1	O95644	943 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	GLUD1	P00367	558 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	CGA	P01215	116 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	SRGAP2B	P0DMP2	458 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	SLC5A1	P13866	664 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	CPA1	P15085	419 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	ARSB	P15848	533 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	PECAM1	P16284	738 aa	Predicted RBP	3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	STT3A	P46977	705 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	GLUD2	P49448	558 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	RPL36A	P83881	106 aa	Known RBP	3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	CRYZ	Q08257	329 aa	Known RBP	3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	SHB	Q15464	509 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	KLHDC7A	Q5VTJ3	777 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	RTL10	Q7L3V2	364 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	DPP9	Q86TI2	863 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	WDR75	Q8IWA0	830 aa	Known RBP	3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	ADGRF3	Q8IZF5	1079 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	CCDC33	Q8N5R6	958 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	GABPB2	Q8TAK5	448 aa	Predicted RBP	3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	BICD2	Q8TD16	824 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	TM6SF1	Q9BZW5	370 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	TBC1D14	Q9P2M4	693 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	MAN2B2	Q9Y2E5	1009 aa		3.78	□□□□□ -1.8
UBR1-209	ENST00000569243	CYP3A7-CYP3A51P	A0A087WV96	503 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	LOC105369274	A0A096LPK9	316 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	LOC102723532	A0A0G2JNH3	316 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	PNMA6E	A0A0J9YXQ4	647 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	KCNJ18	B7U540	433 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	TAF5L	O75529	589 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	KAT7	O95251	611 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	ACAA1	P09110	424 aa	Predicted RBP	3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	TRIM27	P14373	513 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	CYP3A7	P24462	503 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	RRP1	P56182	461 aa	Known RBP	3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	IFIT5	Q13325	482 aa	Known RBP	3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	AAK1	Q2M2I8	961 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	ARHGAP15	Q53QZ3	475 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	INO80D	Q53TQ3	878 aa	Predicted RBP	3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	OTUD3	Q5T2D3	398 aa	Predicted RBP	3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	SLC16A12	Q6ZSM3	486 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	OR4N4	Q8N0Y3	316 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	GLIS1	Q8NBF1	620 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	CDT1	Q9H211	546 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	C6orf106	Q9H6K1	298 aa	Predicted RBP	3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	TM7SF3	Q9NS93	570 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	SLC4A4	Q9Y6R1	1079 aa		3.77	□□□□□ -1.81
UBR1-209	ENST00000569243	KPNA5	O15131	536 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	NEURL1	O76050	574 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	FGF18	O76093	207 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	PARN	O95453	639 aa	Known RBP	3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	PLG	P00747	810 aa	Predicted RBP	3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	ALDOA	P04075	364 aa	Known RBP	3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	CYP1A2	P05177	515 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	PKM	P14618	531 aa	Known RBP	3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	HOXA11	P31270	313 aa	Predicted RBP	3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	STAT1	P42224	750 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	PRIM2	P49643	509 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	ART1	P52961	327 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	ZP1	P60852	638 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	PMPCA	Q10713	525 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	ALG10	Q5BKT4	473 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	ALG10B	Q5I7T1	473 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	DNTTIP2	Q5QJE6	756 aa	Known RBP	3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	LCE1F	Q5T754	118 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	OTUD1	Q5VV17	481 aa	Predicted RBP	3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	HMBOX1	Q6NT76	420 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	IGFN1	Q86VF2	1251 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	GPSM1	Q86YR5	675 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	CAMK1D	Q8IU85	385 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	FAM185A	Q8N0U4	392 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	SLC22A17	Q8WUG5	538 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	KAT2A	Q92830	837 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	SLITRK1	Q96PX8	696 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	3.76	□□□□□ -1.81	2e-6	■■■■■ 27.7
UBR1-209	ENST00000569243	RMI1	Q9H9A7	625 aa		3.76	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms