RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 SIN3BO75182 1162 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 GRAP2O75791 330 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 FSBPO95073 299 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 TPM2P07951 284 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 CD59P13987 128 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 NOS2P35228 1153 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 SLC6A3Q01959 620 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 NME3Q13232 169 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 MMS22LQ6ZRQ5 1243 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 FAM183BPQ6ZVS7 135 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 SLC47A2Q86VL8 602 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 NAXDQ8IW45 347 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 DHX40Q8IX18 779 aaKnown RBP17.16■□□□□ 0.34
CDR2-207ENST00000569045 FAM71AQ8IYT1 594 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 CCAR2Q8N163 923 aaKnown RBP17.16■□□□□ 0.34
CDR2-207ENST00000569045 MYEOVQ96EZ4 313 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 RPRD1AQ96P16 312 aaPredicted RBP17.16■□□□□ 0.34
CDR2-207ENST00000569045 OMDQ99983 421 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 PABPC3Q9H361 631 aaKnown RBP17.16■□□□□ 0.34
CDR2-207ENST00000569045 C6orf106Q9H6K1 298 aaPredicted RBP17.16■□□□□ 0.34
CDR2-207ENST00000569045 GAREM1Q9H706 876 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 SIX2Q9NPC8 291 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 FBXL12Q9NXK8 326 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 INTS6Q9UL03 887 aaKnown RBP17.16■□□□□ 0.34
CDR2-207ENST00000569045 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.16■□□□□ 0.34
CDR2-207ENST00000569045 LRRC72A6NJI9 287 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 DAB1O75553 588 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 ZNF883P0CG24 379 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 EEF1GP26641 437 aaKnown RBP17.15■□□□□ 0.34
CDR2-207ENST00000569045 CD27P26842 260 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 CLCN1P35523 988 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 KCNJ12Q14500 433 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 TRIP6Q15654 476 aaKnown RBP17.15■□□□□ 0.34
CDR2-207ENST00000569045 CST6Q15828 149 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 ZNF423Q2M1K9 1284 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 HSP90AA4PQ58FG1 418 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 OLFML1Q6UWY5 402 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 SLC26A9Q7LBE3 791 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 ADAT2Q7Z6V5 191 aaKnown RBP17.15■□□□□ 0.34
CDR2-207ENST00000569045 SETD7Q8WTS6 366 aaKnown RBP17.15■□□□□ 0.34
CDR2-207ENST00000569045 MRGPRX3Q96LB0 322 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 ADAM33Q9BZ11 813 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 OSGEPQ9NPF4 335 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 STAP1Q9ULZ2 295 aa17.15■□□□□ 0.34
CDR2-207ENST00000569045 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.14■□□□□ 0.33
CDR2-207ENST00000569045 FAM47DPA6NHR8 397 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 TTC34A8MYJ7 566 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 M0QYT0 321 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 SH3BP5O60239 455 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 GJB3O75712 270 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 RNASEH2AO75792 299 aaKnown RBP17.14■□□□□ 0.33
CDR2-207ENST00000569045 ADH1BP00325 375 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 ERBB2P04626 1255 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 PROS1P07225 676 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 PDGFRAP16234 1089 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 CTSOP43234 321 aaPredicted RBP17.14■□□□□ 0.33
CDR2-207ENST00000569045 PITX1P78337 314 aaPredicted RBP17.14■□□□□ 0.33
CDR2-207ENST00000569045 ZNF177Q13360 481 aaPredicted RBP17.14■□□□□ 0.33
CDR2-207ENST00000569045 EIF4EBP2Q13542 120 aaPredicted RBP17.14■□□□□ 0.33
CDR2-207ENST00000569045 DRAP1Q14919 205 aaPredicted RBP17.14■□□□□ 0.33
CDR2-207ENST00000569045 SUZ12Q15022 739 aaKnown RBP17.14■□□□□ 0.33
CDR2-207ENST00000569045 HLA-BQ31612 363 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 C9orf64Q5T6V5 341 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 UNQ6494/PRO21346Q6UXR6 183 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 DSG4Q86SJ6 1040 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 MMAAQ8IVH4 418 aaKnown RBP17.14■□□□□ 0.33
CDR2-207ENST00000569045 APCDD1Q8J025 514 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 ZNF397Q8NF99 534 aaPredicted RBP17.14■□□□□ 0.33
CDR2-207ENST00000569045 SKA1Q96BD8 255 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 BIRC7Q96CA5 298 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 MYO19Q96H55 970 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 PRMT1Q99873 361 aaKnown RBP17.14■□□□□ 0.33
CDR2-207ENST00000569045 SCNM1Q9BWG6 230 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 MTG2Q9H4K7 406 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDR2-207ENST00000569045 SLC25A13Q9UJS0 675 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 FZD4Q9ULV1 537 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 ITIH6Q6UXX5 1313 aa17.14■□□□□ 0.33
CDR2-207ENST00000569045 USP24Q9UPU5 2620 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 A0A1B0GVT2 93 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 MID1O15344 667 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 F9P00740 461 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 SLC8A1P32418 973 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 GRIA4P48058 902 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 CSNK1EP49674 416 aaKnown RBP17.13■□□□□ 0.33
CDR2-207ENST00000569045 RNASE9P60153 205 aaKnown RBP17.13■□□□□ 0.33
CDR2-207ENST00000569045 AUHQ13825 339 aaKnown RBP17.13■□□□□ 0.33
CDR2-207ENST00000569045 ELAVL3Q14576 367 aaKnown RBP17.13■□□□□ 0.33
CDR2-207ENST00000569045 PTPN20Q4JDL3 420 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 MIIPQ5JXC2 388 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 ACBD5Q5T8D3 534 aaPredicted RBP17.13■□□□□ 0.33
CDR2-207ENST00000569045 KLHDC7AQ5VTJ3 777 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 KIAA0895LQ68EN5 471 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 FBXL22Q6P050 247 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 ERICH1Q86X53 443 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 C1orf216Q8TAB5 229 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 C18orf8Q96DM3 657 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 RPL10LQ96L21 214 aaKnown RBP17.13■□□□□ 0.33
CDR2-207ENST00000569045 WDCPQ9H6R7 721 aa17.13■□□□□ 0.33
CDR2-207ENST00000569045 TM9SF3Q9HD45 589 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms