RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 WBP1Q96G27 269 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 PAGE5Q96GU1 130 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 MRGPRX3Q96LB0 322 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 PRICKLE1Q96MT3 831 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 DDX50Q9BQ39 737 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 CNGB3Q9NQW8 809 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 SERTAD1Q9UHV2 236 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 EDDM13A0A1B0GTR0 161 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 GOLGA6L7A0A1B0GV03 622 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 TTC34A8MYJ7 566 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 ACTN4O43707 911 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 ACSL4O60488 711 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 SETSIPP0DME0 302 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 RPL13P26373 211 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 MXI1P50539 228 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 TMPRSS3P57727 454 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 PPP2CBP62714 309 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 PPP2CAP67775 309 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 OVGP1Q12889 678 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 SGO2Q562F6 1265 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 IQCHQ86VS3 1027 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 SPATS2Q86XZ4 545 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 CCDC117Q8IWD4 279 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 SCML4Q8N228 414 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 FBXL13Q8NEE6 735 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 KCTD13Q8WZ19 329 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 SEMA4DQ92854 862 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 AZIN2Q96A70 460 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 ZNF578Q96N58 590 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 FOXD4L1Q9NU39 408 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 RAB20Q9NX57 234 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 INTS6Q9UL03 887 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 PCDHA7Q9UN72 937 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 ERVW-1Q9UQF0 538 aa12.23□□□□□ -0.45
GTF3C1-209ENST00000568569 ITIH6Q6UXX5 1313 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 TBC1D3DA0A087WVF3 549 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 TBC1D3IA0A087WXS9 549 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 TBC1D3EA0A087X179 549 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 TBC1D3KA0A087X1G2 549 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 TBC1D3FA6NER0 549 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 TBC1D3LB9A6J9 549 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 SDC3O75056 442 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 MOCS3O95396 460 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 MT-CO3P00414 261 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 IL1BP01584 269 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 MYL1P05976 194 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 TBC1D3HP0C7X1 549 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 MZF1P28698 734 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 NUDT1P36639 197 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 TBX4P57082 545 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 DAOAP59103 153 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 RPS24P62847 133 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 ECT2LQ008S8 904 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 ZNF211Q13398 564 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 ELAVL3Q14576 367 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 PKDCCQ504Y2 493 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 HS1BP3Q53T59 392 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 PITRM1Q5JRX3 1037 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 RNF219Q5W0B1 726 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 TBC1D3GQ6DHY5 549 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 NADSYN1Q6IA69 706 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 TBC1D3CQ6IPX1 549 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 KDM7AQ6ZMT4 941 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 PRPF39Q86UA1 669 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 TBC1D3Q8IZP1 549 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 LSMEM2Q8N112 164 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 STK40Q8N2I9 435 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 CARNMT1Q8N4J0 409 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 NAF1Q96HR8 494 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 HIC2Q96JB3 615 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 FAM129BQ96TA1 746 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 KDM4CQ9H3R0 1056 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 DMTF1Q9Y222 760 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 CEP83Q9Y592 693 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 ARID1BQ8NFD5 2236 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 MYO18BQ8IUG5 2567 aa12.22□□□□□ -0.45
GTF3C1-209ENST00000568569 PLXNA2O75051 1894 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 HECTD1Q9ULT8 2610 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 O00370 1275 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 TRIM38O00635 465 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 SIGLEC6O43699 453 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 DXOO77932 396 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 LUC7L3O95232 432 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 LCP1P13796 627 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 CD19P15391 556 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 DRD3P35462 400 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 CTSOP43234 321 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 DAB2P98082 770 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 STAT4Q14765 748 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 FSCBQ5H9T9 825 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 MMS22LQ6ZRQ5 1243 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 UBA3Q8TBC4 463 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 IRGQQ8WZA9 623 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 CCDC47Q96A33 483 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 ARHGAP20Q9P2F6 1191 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 CYTH4Q9UIA0 394 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 PCDHB1Q9Y5F3 818 aa12.21□□□□□ -0.45
GTF3C1-209ENST00000568569 SLC7A4O43246 635 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 STX10O60499 249 aa12.2□□□□□ -0.46
GTF3C1-209ENST00000568569 MPOP05164 745 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms