RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 CYP2R1Q6VVX0 501 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 RNF111Q6ZNA4 994 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 ZNF567Q8N184 647 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 RYBPQ8N488 228 aaPredicted RBP9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 RNF139Q8WU17 664 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 RCN3Q96D15 328 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 RNF39Q9H2S5 420 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 GPBP1L1Q9HC44 474 aaPredicted RBP9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 TSR3Q9UJK0 312 aaKnown RBP9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 POMPQ9Y244 141 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 FAM159BA6NKW6 160 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 RECQL4O94761 1208 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 C22orf31O95567 290 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 JCHAINP01591 159 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 JUNP05412 331 aaKnown RBP9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 HNRNPLP14866 589 aaKnown RBP eCLIP9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 ITGAXP20702 1163 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 PRKCHP24723 683 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 TKTP29401 623 aaKnown RBP9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 DEUP1Q05D60 604 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 CTBP1Q13363 440 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 TTLL4Q14679 1199 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 USP10Q14694 798 aaKnown RBP9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 CNGA3Q16281 694 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 GEN1Q17RS7 908 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 FBXO48Q5FWF7 155 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 PIGZQ86VD9 579 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 ICA1LQ8NDH6 482 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 IPMKQ8NFU5 416 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 TSNARE1Q96NA8 513 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 COPG2Q9UBF2 871 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 EFR3BQ9Y2G0 817 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 DTNAQ9Y4J8 743 aa9.18□□□□□ -0.94
HDGFL3-206ENST00000568294 COL2A1P02458 1487 aaPredicted RBP9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 A0A0A0MRY4 1105 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 XPO1O14980 1071 aaKnown RBP9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 USP2O75604 605 aaPredicted RBP9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 MX2P20592 715 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 ICAM3P32942 547 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 PDK1Q15118 436 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 CNPY1Q3B7I2 92 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 PRAMEF19Q5SWL8 479 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 C6orf52Q5T4I8 152 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 CWF19L1Q69YN2 538 aaKnown RBP9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 SLC41A1Q8IVJ1 513 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 SPATA22Q8NHS9 363 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 DIS3LQ8TF46 1054 aaKnown RBP9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 KCTD4Q8WVF5 259 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 EMID1Q96A84 441 aaPredicted RBP9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 CERS2Q96G23 380 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 LRGUKQ96M69 825 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 SPATA13Q96N96 652 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 OCEL1Q9H607 264 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 SUDS3Q9H7L9 328 aaPredicted RBP9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 IGKV6D-21A0A0A0MT36 114 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 ATP6AP2A0A1C7CYW4 349 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 LIN7AO14910 233 aaPredicted RBP9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 TSPAN1O60635 241 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 ATP6AP2O75787 350 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 PIGNO95427 931 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 C1QAP02745 245 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 POLBP06746 335 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 COX4I1P13073 169 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 NCAM1P13591 858 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 PMLP29590 882 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 GARSP41250 739 aaKnown RBP9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 GABRB2P47870 512 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 RALGDSQ12967 914 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 ART3Q13508 389 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 FLOT2Q14254 428 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 PITRM1Q5JRX3 1037 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 FSTL4Q6MZW2 842 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 OTOP3Q7RTS5 596 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 CEP70Q8NHQ1 597 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 NDNQ99608 321 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 FRMD8P1Q9BZ68 369 aaPredicted RBP9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 KLHL4Q9C0H6 718 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 TCF7L2Q9NQB0 619 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 TLK1Q9UKI8 766 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 VANGL2Q9ULK5 521 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 TLL2Q9Y6L7 1015 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 V9GYQ6 96 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 EVPLQ92817 2033 aa9.17□□□□□ -0.94
HDGFL3-206ENST00000568294 A0A1B0GTW7 788 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 BCLAF3A2AJT9 711 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 SPTLC1O15269 473 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 ZBTB24O43167 697 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 AHCYL1O43865 530 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 PMPCBO75439 489 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 SERPINB9P50453 376 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 TPI1P60174 286 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 PRAMEP78395 509 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 MPP1Q00013 466 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 TNFAIP2Q03169 654 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 NOMO2Q5JPE7 1267 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 ARMCX2Q7L311 632 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 MYLK4Q86YV6 388 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 KHSRPQ92945 711 aaKnown RBP eCLIP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms