RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	CTNNAL1	Q9UBT7	734 aa		5.22	□□□□□ -1.57
CBFB-208	ENST00000567947	RCOR1	Q9UKL0	485 aa		5.22	□□□□□ -1.57
CBFB-208	ENST00000567947	AGAP1	Q9UPQ3	857 aa		5.22	□□□□□ -1.57
CBFB-208	ENST00000567947	GAK	O14976	1311 aa		5.22	□□□□□ -1.57
CBFB-208	ENST00000567947	MYH15	Q9Y2K3	1946 aa		5.21	□□□□□ -1.57
CBFB-208	ENST00000567947	DDX60L	Q5H9U9	1706 aa	Known RBP	5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	GOLGA6L10	A0A0M3HER8	536 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CTAGE15	A4D2H0	777 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	MGRN1	O60291	552 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	POU2F2	P09086	479 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CTAGE8	P0CG41	777 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	PAX7	P23759	505 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CCND1	P24385	295 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	PCSK6	P29122	969 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	ABCD1	P33897	745 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	TM4SF4	P48230	202 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CTCF	P49711	727 aa	Predicted RBP	5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	RAB27A	P51159	221 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CCNG1	P51959	295 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	XRCC4	Q13426	336 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	TBC1D25	Q3MII6	688 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	SUPT20HL1	Q3ZLR7	823 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	LACTB2	Q53H82	288 aa	Predicted RBP	5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	HSP90AB4P	Q58FF6	505 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	NUGGC	Q68CJ6	796 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	ARMCX5	Q6P1M9	558 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	SLC30A9	Q6PML9	568 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	MTHFD1L	Q6UB35	978 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CCDC73	Q6ZRK6	1079 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CTAGE6	Q86UF2	777 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CTAGE4	Q8IX94	777 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CPA6	Q8N4T0	437 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CERS5	Q8N5B7	392 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	LSM14A	Q8ND56	463 aa	Known RBP	5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CCDC148	Q8NFR7	591 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	TRIM58	Q8NG06	486 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	HASPIN	Q8TF76	798 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CCDC51	Q96ER9	411 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CCDC34	Q96HJ3	373 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	NUP88	Q99567	741 aa	Predicted RBP	5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	LLPH	Q9BRT6	129 aa	Known RBP	5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CAPS2	Q9BXY5	557 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	AMBRA1	Q9C0C7	1298 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	SMOC2	Q9H3U7	446 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	ANKZF1	Q9H8Y5	726 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CNNM1	Q9NRU3	951 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	MRPS18A	Q9NVS2	196 aa	Known RBP	5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	TRMT1	Q9NXH9	659 aa	Known RBP	5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	PPP2R2C	Q9Y2T4	447 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	GMEB1	Q9Y692	573 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	CAPN7	Q9Y6W3	813 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	SSC5D	A1L4H1	1573 aa		5.21	□□□□□ -1.58
CBFB-208	ENST00000567947	PHIP	Q8WWQ0	1821 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CASP8AP2	Q9UKL3	1982 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	TNRC18	O15417	2968 aa	Predicted RBP	5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CENPF	P49454	3210 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	VWA3A	A6NCI4	1184 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	GOLGA6C	A6NDK9	693 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947		F5H697	171 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	HIP1	O00291	1037 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	PRC1	O43663	620 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	KIF5C	O60282	957 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	SYF2	O95926	243 aa	Known RBP	5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	GSTA1	P08263	222 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	VIM	P08670	466 aa	Known RBP	5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CCDC175	P0C221	793 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	GOLGA6D	P0CG33	693 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	SLC5A1	P13866	664 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	TYR	P14679	529 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	GJB2	P29033	226 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CCNH	P51946	323 aa	Predicted RBP	5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	DEUP1	Q05D60	604 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CKAP4	Q07065	602 aa	Known RBP	5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	C1QTNF12	Q5T7M4	302 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	TSTD2	Q5T7W7	516 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CAPRIN2	Q6IMN6	1127 aa	Known RBP	5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	NAA16	Q6N069	864 aa	Predicted RBP	5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CCDC70	Q6NSX1	233 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	RGMB	Q6NW40	437 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CEP85	Q6P2H3	762 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CPLX2	Q6PUV4	134 aa	Known RBP	5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	HEATR3	Q7Z4Q2	680 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	TRIM74	Q86UV6	250 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	TRIM73	Q86UV7	250 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	GALNT15	Q8N3T1	639 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	ARFGAP2	Q8N6H7	521 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	BCAS4	Q8TDM0	211 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CDCA5	Q96FF9	252 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CAPNS2	Q96L46	248 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	ZNF396	Q96N95	335 aa	Predicted RBP	5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	AGAP3	Q96P47	875 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	SPAG5	Q96R06	1193 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	PANX2	Q96RD6	677 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	SMAD5	Q99717	465 aa	Known RBP	5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	CCDC28B	Q9BUN5	200 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	IDI2	Q9BXS1	227 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	LRRCC1	Q9C099	1032 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	GBA2	Q9HCG7	927 aa	Predicted RBP	5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	GOLGA6A	Q9NYA3	693 aa		5.2	□□□□□ -1.58
CBFB-208	ENST00000567947	GGA3	Q9NZ52	723 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms