RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 RTP3Q9BQQ7 232 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 MED10Q9BTT4 135 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 CADM1Q9BY67 442 aaKnown RBP18.19■□□□□ 0.5
CMTM3-214ENST00000567572 DENND2DQ9H6A0 471 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-214ENST00000567572 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.19■□□□□ 0.5
CMTM3-214ENST00000567572 PTCH2Q9Y6C5 1203 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 HMX2A2RU54 273 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 GSC2O15499 205 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 EOMESO95936 686 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 VAV1P15498 845 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 PCSK1P29120 753 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 ZNF135P52742 658 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-214ENST00000567572 CHI3L2Q15782 390 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 SLC24A5Q71RS6 500 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 PDZD4Q76G19 769 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-214ENST00000567572 RNF139Q8WU17 664 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 SLC2A13Q96QE2 648 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 NPY6RQ99463 290 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 PCMTD2Q9NV79 361 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 THAP1Q9NVV9 213 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 SAGE1Q9NXZ1 904 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 LRRC42Q9Y546 428 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 FBXO21O94952 628 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 MAP3K6O95382 1288 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 AMPD1P23109 780 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 BRCC3P46736 316 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 FAM189BP81408 668 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 BMPR2Q13873 1038 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 PAN2Q504Q3 1202 aaKnown RBP18.18■□□□□ 0.5
CMTM3-214ENST00000567572 DENND5BQ6ZUT9 1274 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 DEFB106AQ8N104 65 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 MPP5Q8N3R9 675 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 COLGALT1Q8NBJ5 622 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 NTAN1Q96AB6 310 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 MCUR1Q96AQ8 359 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 ZNF570Q96NI8 536 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 SMOQ99835 787 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.18■□□□□ 0.56e-8■■■■■ 50.5
CMTM3-214ENST00000567572 BRD8Q9H0E9 1235 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 STOML1Q9UBI4 398 aa18.18■□□□□ 0.5
CMTM3-214ENST00000567572 RNF103O00237 685 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 NCAM2O15394 837 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 MFSD11O43934 449 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 MAGEC1O60732 1142 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 RPSAP08865 295 aaKnown RBP18.17■□□□□ 0.5
CMTM3-214ENST00000567572 GM2AP17900 193 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 ATXN1P54253 815 aaKnown RBP18.17■□□□□ 0.5
CMTM3-214ENST00000567572 MAP3K7CLP57077 242 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 MROH9Q5TGP6 573 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 SLC13A1Q9BZW2 595 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 LRRC4Q9HBW1 653 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 FBXO6Q9NRD1 293 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-214ENST00000567572 TMEM30AQ9NV96 361 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 DCDC2Q9UHG0 476 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 DSEQ9UL01 958 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 HBS1LQ9Y450 684 aaKnown RBP18.17■□□□□ 0.5
CMTM3-214ENST00000567572 FAM237BA0A1B0GVD1 139 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 CAPN14A8MX76 684 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 UGT1A9O60656 530 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 AP1G2O75843 785 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 SCAPQ12770 1279 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 STX3Q13277 289 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 INTS6LQ5JSJ4 861 aaKnown RBP18.17■□□□□ 0.5
CMTM3-214ENST00000567572 DCLRE1AQ6PJP8 1040 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 GLB1LQ6UWU2 654 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 FAM131BQ86XD5 332 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 TEX9Q8N6V9 391 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 ZMIZ2Q8NF64 920 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 RSPH1Q8WYR4 309 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 NDRG1Q92597 394 aaKnown RBP18.17■□□□□ 0.5
CMTM3-214ENST00000567572 P2RY11Q96G91 374 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 ACBD6Q9BR61 282 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 UGT1A7Q9HAW7 530 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 UGT1A10Q9HAW8 530 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 UGT1A8Q9HAW9 530 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 ADAM28Q9UKQ2 775 aa18.17■□□□□ 0.5
CMTM3-214ENST00000567572 ERI2A8K979 691 aaKnown RBP18.16■□□□□ 0.5
CMTM3-214ENST00000567572 MTSS1O43312 755 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 ITGB1P05556 798 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 HCAR3P49019 387 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 NDUFV1P49821 464 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 CDK7P50613 346 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 TKTL1P51854 596 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 RAP1GDS1P52306 607 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 CACNA2D1P54289 1103 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 DPYSQ14117 519 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 RAB41Q5JT25 222 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 CLLU1OSQ5K130 101 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 SPANXN3Q5MJ09 141 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 OTUD1Q5VV17 481 aaPredicted RBP18.16■□□□□ 0.5
CMTM3-214ENST00000567572 FAM171BQ6P995 826 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 PACS1Q6VY07 963 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 LRRC8DQ7L1W4 858 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 METTL23Q86XA0 190 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 TMPRSS6Q8IU80 811 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 ARID3BQ8IVW6 561 aaPredicted RBP18.16■□□□□ 0.5
CMTM3-214ENST00000567572 SIX6OS1Q8N1H7 587 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 GPATCH11Q8N954 259 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 HASPINQ8TF76 798 aa18.16■□□□□ 0.5
CMTM3-214ENST00000567572 ISL2Q96A47 359 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms