RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 PITRM1Q5JRX3 1037 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 SYPL2Q5VXT5 272 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 RAP1GAP2Q684P5 730 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 KIAA0895LQ68EN5 471 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 LRSAM1Q6UWE0 723 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 GLRX5Q86SX6 157 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 TMEM110Q86TL2 294 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 CHSY1Q86X52 802 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 ATP6V0D2Q8N8Y2 350 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 RNF34Q969K3 372 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 SKA1Q96BD8 255 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 BTN2A3PQ96KV6 586 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 OMDQ99983 421 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 MTG2Q9H4K7 406 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 FAM204AQ9H8W3 233 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.35□□□□□ -0.43
UBR1-206ENST00000566493 ANKRD6Q9Y2G4 727 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 FNDC3AQ9Y2H6 1198 aaKnown RBP12.35□□□□□ -0.43
UBR1-206ENST00000566493 SNX11Q9Y5W9 270 aa12.35□□□□□ -0.43
UBR1-206ENST00000566493 EDDM13A0A1B0GTR0 161 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 LRRC72A6NJI9 287 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 SRRM3A6NNA2 597 aaPredicted RBP12.34□□□□□ -0.43
UBR1-206ENST00000566493 F5H5T6 163 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 PAPSS1O43252 624 aaPredicted RBP12.34□□□□□ -0.43
UBR1-206ENST00000566493 CBFA2T3O75081 653 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 RNASEH2AO75792 299 aaKnown RBP12.34□□□□□ -0.43
UBR1-206ENST00000566493 SLC2A3P11169 496 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 ABCB4P21439 1286 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 TACR2P21452 398 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 C21orf59P57076 290 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 CDK17Q00537 523 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 PDCLQ13371 301 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 ARID5BQ14865 1188 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 CST6Q15828 149 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 ARHGAP44Q17R89 818 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 TRIM65Q6PJ69 517 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 GBP6Q6ZN66 633 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 MMS22LQ6ZRQ5 1243 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 MMAAQ8IVH4 418 aaKnown RBP12.34□□□□□ -0.43
UBR1-206ENST00000566493 IGSF8Q969P0 613 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 MYEOVQ96EZ4 313 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 MYO19Q96H55 970 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 MRGPRX3Q96LB0 322 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 NOX5Q96PH1 765 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 CRACR2AQ9BSW2 395 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 XPO7Q9UIA9 1087 aaKnown RBP12.34□□□□□ -0.43
UBR1-206ENST00000566493 RWDD2AQ9UIY3 292 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 INTS6Q9UL03 887 aaKnown RBP12.34□□□□□ -0.43
UBR1-206ENST00000566493 NUMA1Q14980 2115 aa12.34□□□□□ -0.43
UBR1-206ENST00000566493 CEP295Q9C0D2 2601 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 A0A1W2PP55 124 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 TTC34A8MYJ7 566 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 KCNU1A8MYU2 1149 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 MID1O15344 667 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 DFNA5O60443 496 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 GLI1P08151 1106 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 SLC9A1P19634 815 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 SLC8A1P32418 973 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 CTSOP43234 321 aaPredicted RBP12.33□□□□□ -0.44
UBR1-206ENST00000566493 CCT8P50990 548 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 GALCP54803 685 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 OXCT1P55809 520 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 SNX16P57768 344 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 SULT2A1Q06520 285 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 SLC12A1Q13621 1099 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 INAVAQ3KP66 663 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 EFHC1Q5JVL4 640 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 RABGAP1LQ5R372 815 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 C9orf64Q5T6V5 341 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 TTC39BQ5VTQ0 682 aaPredicted RBP12.33□□□□□ -0.44
UBR1-206ENST00000566493 DBX2Q6ZNG2 339 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 SLCO6A1Q86UG4 719 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 PPP1R13BQ96KQ4 1090 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 PPP1R9BQ96SB3 815 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 ACE2Q9BYF1 805 aaPredicted RBP12.33□□□□□ -0.44
UBR1-206ENST00000566493 ACP6Q9NPH0 428 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 APEX2Q9UBZ4 518 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 CYTH4Q9UIA0 394 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 RALYQ9UKM9 306 aaKnown RBP12.33□□□□□ -0.44
UBR1-206ENST00000566493 FZD4Q9ULV1 537 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 SLCO1B1Q9Y6L6 691 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 TMEM131Q92545 1883 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 CFAP47Q6ZTR5 3102 aa12.33□□□□□ -0.44
UBR1-206ENST00000566493 ZFHX4Q86UP3 3567 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 SYNJ2BP-COX16A0A087WUM0 186 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 GOLGA8CPA6NN73 597 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 KCNK3O14649 394 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 HSF2BPO75031 334 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 ADH1BP00325 375 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 IGLV3-25P01717 112 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 IGHV4-34P06331 123 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 C5AR1P21730 350 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 CCR1P32246 355 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 GRK6P43250 576 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 MTIF2P46199 727 aaKnown RBP12.32□□□□□ -0.44
UBR1-206ENST00000566493 PSMD8P48556 350 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 RACK1P63244 317 aaKnown RBP12.32□□□□□ -0.44
UBR1-206ENST00000566493 PTK2Q05397 1052 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 SCAPQ12770 1279 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 MTA1Q13330 715 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms