RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ZNF557Q8N988 423 aaPredicted RBP9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 KDM1BQ8NB78 822 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 WDR48Q8TAF3 677 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 SLC2A14Q8TDB8 520 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 LARP4BQ92615 738 aaKnown RBP9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 SYAP1Q96A49 352 aaPredicted RBP9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 ARRDC3Q96B67 414 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 MTG2Q9H4K7 406 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 TMPRSS4Q9NRS4 437 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 TBC1D7Q9P0N9 293 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 PCDHB11Q9Y5F2 797 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 NBASA2RRP1 2371 aa9.41□□□□□ -0.9
VPS9D1-205ENST00000565452 BSNQ9UPA5 3926 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 K7ESM1 405 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 PHACTR2O75167 634 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 PPP6R2O75170 966 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 PIAS2O75928 621 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 YEATS4O95619 227 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 ASLP04424 464 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 SLFN14P0C7P3 912 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 FAM200BP0CF97 657 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 GIMD1P0DJR0 217 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 DLATP10515 647 aaKnown RBP9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 ELAVL4P26378 380 aaKnown RBP9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 MAT2AP31153 395 aaKnown RBP9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 NASPP49321 788 aaPredicted RBP9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 KIF11P52732 1056 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 MYL6P60660 151 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 ZNF177Q13360 481 aaPredicted RBP9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 ARID5BQ14865 1188 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 CLCA4Q14CN2 919 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 SLC39A14Q15043 492 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 TGIF1Q15583 401 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 SETMARQ53H47 684 aaPredicted RBP9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 RSRC2Q7L4I2 434 aaKnown RBP9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 CCDC186Q7Z3E2 898 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 DSG4Q86SJ6 1040 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 SCD5Q86SK9 330 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 ATCAYQ86WG3 371 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 JAMLQ86YT9 394 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 ARHGAP18Q8N392 663 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 TTC17Q96AE7 1141 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 PLD4Q96BZ4 506 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 IFT43Q96FT9 208 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 FAM129BQ96TA1 746 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 CHMP5Q9NZZ3 219 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 MARCH2Q9P0N8 246 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 CYTH4Q9UIA0 394 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 ACSL6Q9UKU0 697 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 PCDHGA4Q9Y5G9 962 aa9.4□□□□□ -0.9
VPS9D1-205ENST00000565452 RELNP78509 3460 aa9.4□□□□□ -0.91
VPS9D1-205ENST00000565452 UTP20O75691 2785 aaKnown RBP9.4□□□□□ -0.91
VPS9D1-205ENST00000565452 SPTBN1Q01082 2364 aaKnown RBP9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 EDDM13A0A1B0GTR0 161 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 PLD2O14939 933 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 NVLO15381 856 aaKnown RBP9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 CLSTN1O94985 981 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 LIPCP11150 499 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 P4HA1P13674 534 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 CCDC130P13994 396 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 LONP1P36776 959 aaKnown RBP9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 PSMD8P48556 350 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 HNRNPKP61978 463 aaKnown RBP eCLIP9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 EIF3IQ13347 325 aaKnown RBP9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 CDKN3Q16667 212 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 ADGRF1Q5T601 910 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 ZCCHC8Q6NZY4 707 aaKnown RBP9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 BORAQ6PGQ7 559 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 GPRIN1Q7Z2K8 1008 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 EFL1Q7Z2Z2 1120 aaKnown RBP9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 CBWD2Q8IUF1 395 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 ZC3H3Q8IXZ2 948 aaKnown RBP9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 FBXO39Q8N4B4 442 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 AADATQ8N5Z0 425 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 GLMNQ92990 594 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 JAKMIP2Q96AA8 810 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 SCAND2PQ9GZW5 306 aaPredicted RBP9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 PNPLA8Q9NP80 782 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 TUBD1Q9UJT1 453 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 RCOR1Q9UKL0 485 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 ZDHHC9Q9Y397 364 aa9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 SRPRBQ9Y5M8 271 aaKnown RBP9.39□□□□□ -0.91
VPS9D1-205ENST00000565452 ITPR2Q14571 2701 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 MYH11P35749 1972 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 LY6G6EA0A0G2JKS1 128 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 PMS2P1A4D2B8 440 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 EME2A4GXA9 379 aaPredicted RBP9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 HHLA1C9JL84 531 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 SLC7A4O43246 635 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 KIF20AO95235 890 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 IL1BP01584 269 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 PRR29P0C7W0 189 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 ADORA2BP29275 332 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 UGT1A5P35504 534 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 RPIAP49247 311 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 PPP2CBP62714 309 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 PPP2CAP67775 309 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 CYP4F2P78329 520 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 KRT85P78386 507 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms