RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 XPO6Q96QU8 1125 aaKnown RBP7.66□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ACBD6Q9BR61 282 aa7.66□□□□□ -1.18
MAP1LC3B-205ENST00000564638 FAM107BQ9H098 131 aa7.66□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CYP4F11Q9HBI6 524 aa7.66□□□□□ -1.18
MAP1LC3B-205ENST00000564638 DMAP1Q9NPF5 467 aaPredicted RBP7.66□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PPANQ9NQ55 473 aaKnown RBP7.66□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CLEC1BQ9P126 229 aa7.66□□□□□ -1.18
MAP1LC3B-205ENST00000564638 RSPH14Q9UHP6 348 aa7.66□□□□□ -1.18
MAP1LC3B-205ENST00000564638 FBXW11Q9UKB1 542 aa7.66□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SYNJ2BP-COX16A0A087WUM0 186 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 GMNCA6NCL1 334 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 EEF2KO00418 725 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CCL16O15467 120 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 TBC1D4O60343 1298 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SPAG6O75602 509 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 RFPL2O75678 378 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 BEST1O76090 585 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 OAZ2O95190 189 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 F9P00740 461 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 C8AP07357 584 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CHRM1P11229 460 aaPredicted RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 RBL1P28749 1068 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CCT5P48643 541 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ZNF135P52742 658 aaPredicted RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ATXN1P54253 815 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 NME3Q13232 169 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SMAD4Q13485 552 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 KCNC3Q14003 757 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 COL19A1Q14993 1142 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 FASTKD3Q14CZ7 662 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 AAK1Q2M2I8 961 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ARL13BQ3SXY8 428 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 LEXMQ3ZCV2 418 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CCDC38Q502W7 563 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 NCBP2-AS2Q69YL0 99 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 HEATR6Q6AI08 1181 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PTCRAQ6ISU1 281 aaPredicted RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SLC8B1Q6J4K2 584 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CES5AQ6NT32 575 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 LILRA6Q6PI73 481 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SYCE2Q6PIF2 218 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 RNF19BQ6ZMZ0 732 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 C4orf50Q6ZRC1 276 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CAPN12Q6ZSI9 719 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ARHGEF18Q6ZSZ5 1173 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CCDC149Q6ZUS6 474 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PDZD4Q76G19 769 aaPredicted RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 BNIPLQ7Z465 357 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 EXOC3L1Q86VI1 746 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 TDRPQ86YL5 185 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ANKMY2Q8IV38 441 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 DCP1BQ8IZD4 617 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SCML4Q8N228 414 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 FBXO36Q8NEA4 188 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ZMIZ2Q8NF64 920 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 OR10T2Q8NGX3 314 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ZNF473Q8WTR7 871 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 RNF139Q8WU17 664 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SMG7Q92540 1137 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 NDRG1Q92597 394 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 NT5C3BQ969T7 300 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 MSLNLQ96KJ4 702 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 RTP3Q9BQQ7 232 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ADAM33Q9BZ11 813 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 NSRP1Q9H0G5 558 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 RABEP2Q9H5N1 569 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SFXN1Q9H9B4 322 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PIDD1Q9HB75 910 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CHD8Q9HCK8 2581 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CSNK1G1Q9HCP0 422 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PNPLA8Q9NP80 782 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 RAB6BQ9NRW1 208 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 INTS9Q9NV88 658 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ABI2Q9NYB9 513 aaPredicted RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 NKIRAS1Q9NYS0 192 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 COX16Q9P0S2 106 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SENP1Q9P0U3 644 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CTNNAL1Q9UBT7 734 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 FETUBQ9UGM5 382 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 AFF4Q9UHB7 1163 aaKnown RBP7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 DPP7Q9UHL4 492 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SLC24A2Q9UI40 661 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CDH22Q9UJ99 828 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ACTL7BQ9Y614 415 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 USP3Q9Y6I4 520 aa7.65□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ZNF292O60281 2723 aa7.65□□□□□ -1.19
MAP1LC3B-205ENST00000564638 CACNA1HO95180 2353 aa7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SHROOM3Q8TF72 1996 aa7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 CLUHO75153 1309 aa7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ATXN2Q99700 1313 aaKnown RBP7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 CCDC195A0A1B0GUA6 201 aa7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TMEM120BA0PK00 339 aa7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MTMR11A4FU01 709 aa7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 GRXCR2A6NFK2 248 aa7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 YJEFN3A6XGL0 299 aa7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 HHLA1C9JL84 531 aa7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 E7ENQ6 273 aa7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 POC1B-GALNT4F8VUJ3 575 aa7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 PPP1R12AO14974 1030 aaPredicted RBP7.64□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MBTPS2O43462 519 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms