RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 IFI16Q16666 785 aaKnown RBP12.84□□□□□ -0.35
KARS-204ENST00000564578 GEN1Q17RS7 908 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 TMEM215Q68D42 235 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 FSTL4Q6MZW2 842 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 RWDD4Q6NW29 188 aaKnown RBP12.84□□□□□ -0.35
KARS-204ENST00000564578 CHST9Q7L1S5 443 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 ANKS1BQ7Z6G8 1248 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 TFAP2DQ7Z6R9 452 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 KIAA0907Q7Z7F0 614 aaPredicted RBP12.84□□□□□ -0.35
KARS-204ENST00000564578 MFN1Q8IWA4 741 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 RHOT1Q8IXI2 618 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 CARNMT1Q8N4J0 409 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 TBC1D31Q96DN5 1066 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 PNKPQ96T60 521 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 EPAS1Q99814 870 aa12.84□□□□□ -0.35
KARS-204ENST00000564578 KANSL1LA0AUZ9 987 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 TYW5A2RUC4 315 aaKnown RBP12.83□□□□□ -0.36
KARS-204ENST00000564578 PRRT4C9JH25 899 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 MAN2B1O00754 1011 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 FTCDO95954 541 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 TNNT1P13805 278 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 RHOQP17081 205 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 TARSP26639 723 aaKnown RBP12.83□□□□□ -0.36
KARS-204ENST00000564578 HCAR3P49019 387 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 PEX5P50542 639 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 CDH6P55285 790 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 MMRN1Q13201 1228 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 CCINQ13939 588 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 DPYSQ14117 519 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 DPYSL3Q14195 570 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 C1orf228Q6PIY5 440 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 RFX8Q6ZV50 586 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 TERB1Q8NA31 727 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 ALG14Q96F25 216 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 SHDQ96IW2 340 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 CSPG4P5Q96PW8 444 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 FOXQ1Q9C009 403 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 ARHGEF4Q9NR80 690 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 ABCB8Q9NUT2 735 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 TMEM248Q9NWD8 314 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 INTS6Q9UL03 887 aaKnown RBP12.83□□□□□ -0.36
KARS-204ENST00000564578 PACSIN2Q9UNF0 486 aaPredicted RBP12.83□□□□□ -0.36
KARS-204ENST00000564578 OR51B4Q9Y5P0 310 aa12.83□□□□□ -0.36
KARS-204ENST00000564578 H0Y626 953 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 K7EQS6 105 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 EEF2KO00418 725 aaKnown RBP12.82□□□□□ -0.36
KARS-204ENST00000564578 ZSCAN12O43309 604 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 PSTPIP1O43586 416 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 KAT7O95251 611 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 KDELR1P24390 212 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 OR1E1P30953 314 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 HTR7P34969 479 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 CTNNA1P35221 906 aaKnown RBP12.82□□□□□ -0.36
KARS-204ENST00000564578 TPI1P60174 286 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 KDSRQ06136 332 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 LMAN2Q12907 356 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 CDH18Q13634 790 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 ADIPOR2Q86V24 386 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.82□□□□□ -0.36
KARS-204ENST00000564578 ALG3Q92685 438 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 NOL6Q9H6R4 1146 aaKnown RBP12.82□□□□□ -0.36
KARS-204ENST00000564578 TBC1D17Q9HA65 648 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 LTB4R2Q9NPC1 389 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 HCN2Q9UL51 889 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 NDRG2Q9UN36 371 aaKnown RBP12.82□□□□□ -0.36
KARS-204ENST00000564578 PCDHA3Q9Y5H8 950 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 MIA3Q5JRA6 1907 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 KIAA1549LQ6ZVL6 1849 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.82□□□□□ -0.36
KARS-204ENST00000564578 A0A0D9SEW6 157 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 WASH4PA8MWX3 477 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.82□□□□□ -0.36
KARS-204ENST00000564578 EGFP01133 1207 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 CHRNB1P11230 501 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 ERCC2P18074 760 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 MZF1P28698 734 aaPredicted RBP12.82□□□□□ -0.36
KARS-204ENST00000564578 GRIA2P42262 883 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 NUMBP49757 651 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 ZNF177Q13360 481 aaPredicted RBP12.82□□□□□ -0.36
KARS-204ENST00000564578 PDK2Q15119 407 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 GRAMD4Q6IC98 578 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 SYCE1Q8N0S2 351 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 RTL3Q8N8U3 475 aaKnown RBP12.82□□□□□ -0.36
KARS-204ENST00000564578 KCTD6Q8NC69 237 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 HES6Q96HZ4 224 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 KLC2Q9H0B6 622 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 RETREG1Q9H6L5 497 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 ETNK2Q9NVF9 386 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 DNAI1Q9UI46 699 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 GGA2Q9UJY4 613 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 MFHAS1Q9Y4C4 1052 aa12.82□□□□□ -0.36
KARS-204ENST00000564578 MYO18AQ92614 2054 aaKnown RBP12.81□□□□□ -0.36
KARS-204ENST00000564578 TBC1D3BA6NDS4 549 aa12.81□□□□□ -0.36
KARS-204ENST00000564578 TMEM221A6NGB7 291 aa12.81□□□□□ -0.36
KARS-204ENST00000564578 FAM170BA6NMN3 283 aa12.81□□□□□ -0.36
KARS-204ENST00000564578 M0R296 226 aa12.81□□□□□ -0.36
KARS-204ENST00000564578 DCLK1O15075 740 aa12.81□□□□□ -0.36
KARS-204ENST00000564578 PABPC1P11940 636 aaKnown RBP12.81□□□□□ -0.36
KARS-204ENST00000564578 AMPD1P23109 780 aa12.81□□□□□ -0.36
KARS-204ENST00000564578 CTNNA2P26232 953 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms