RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 NAXDQ8IW45 347 aa17.79■□□□□ 0.44
VPS9D1-203ENST00000563798 ZNF397Q8NF99 534 aaPredicted RBP17.79■□□□□ 0.44
VPS9D1-203ENST00000563798 BIRC7Q96CA5 298 aa17.79■□□□□ 0.44
VPS9D1-203ENST00000563798 NOX5Q96PH1 765 aa17.79■□□□□ 0.44
VPS9D1-203ENST00000563798 CLSTN2Q9H4D0 955 aa17.79■□□□□ 0.44
VPS9D1-203ENST00000563798 MTG2Q9H4K7 406 aa17.79■□□□□ 0.44
VPS9D1-203ENST00000563798 GAREM1Q9H706 876 aa17.79■□□□□ 0.44
VPS9D1-203ENST00000563798 ADAMTS1Q9UHI8 967 aa17.79■□□□□ 0.44
VPS9D1-203ENST00000563798 DNAJC12Q9UKB3 198 aa17.79■□□□□ 0.44
VPS9D1-203ENST00000563798 F5H5T6 163 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 FOXN3O00409 490 aaPredicted RBP17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 HYAL3O43820 417 aaPredicted RBP17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 RNASEH1O60930 286 aaKnown RBP17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 ERCC5P28715 1186 aaPredicted RBP17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 USP8P40818 1118 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 MTIF2P46199 727 aaKnown RBP17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 OXCT1P55809 520 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 OLFML1Q6UWY5 402 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 SLC26A9Q7LBE3 791 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 CREBRFQ8IUR6 639 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 FAM114A1Q8IWE2 563 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 FAM71AQ8IYT1 594 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 CAMK1GQ96NX5 476 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 FAM129BQ96TA1 746 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 IL21RQ9HBE5 538 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 TM9SF3Q9HD45 589 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 TM7SF3Q9NS93 570 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 DDIT4Q9NX09 232 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 AJAP1Q9UKB5 411 aaPredicted RBP17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 PCOLCE2Q9UKZ9 415 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 FZD4Q9ULV1 537 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 NCKAP1Q9Y2A7 1128 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 SLCO1B1Q9Y6L6 691 aa17.78■□□□□ 0.44
VPS9D1-203ENST00000563798 EDDM13A0A1B0GTR0 161 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 A0A1B0GVM2 712 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 A0A1B0GVT2 93 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 TCAF2A6NFQ2 919 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 TTC34A8MYJ7 566 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 IGHV4-34P06331 123 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 ABCB4P21439 1286 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 CDH5P33151 784 aaPredicted RBP17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 CTSOP43234 321 aaPredicted RBP17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 CSNK1EP49674 416 aaKnown RBP17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 BPIFB4P59827 614 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 SULT2A1Q06520 285 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 TEAD4Q15561 434 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 CST6Q15828 149 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 C5orf22Q49AR2 442 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 MIIPQ5JXC2 388 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 KIAA0895LQ68EN5 471 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 ZDHHC17Q8IUH5 632 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 DHX40Q8IX18 779 aaKnown RBP17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 APCDD1Q8J025 514 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 CCAR2Q8N163 923 aaKnown RBP17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 BAHD1Q8TBE0 780 aaPredicted RBP17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 ADAMTS14Q8WXS8 1223 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 PTPRN2Q92932 1015 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 NDST4Q9H3R1 872 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 FAM204AQ9H8W3 233 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 TMEM51Q9NW97 253 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 FBXL12Q9NXK8 326 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 SLCO3A1Q9UIG8 710 aa17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 FNDC3AQ9Y2H6 1198 aaKnown RBP17.77■□□□□ 0.44
VPS9D1-203ENST00000563798 NUMA1Q14980 2115 aa17.77■□□□□ 0.43
VPS9D1-203ENST00000563798 DAB1O75553 588 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 ERBB2P04626 1255 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 NOS2P35228 1153 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 KRT9P35527 623 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 GALCP54803 685 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 SLC6A3Q01959 620 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 KIF19Q2TAC6 998 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 PTPN20Q4JDL3 420 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 VWA3BQ502W6 1294 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 CT47A1Q5JQC4 288 aaPredicted RBP17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 RABGAP1LQ5R372 815 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 CXorf57Q6NSI4 855 aaKnown RBP17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 FBXL22Q6P050 247 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 FAM183BPQ6ZVS7 135 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 SLC47A2Q86VL8 602 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 PASD1Q8IV76 773 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 C1orf131Q8NDD1 294 aaKnown RBP17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 NT5C3BQ969T7 300 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 FAM131CQ96AQ9 280 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 ALG14Q96F25 216 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 PPP1R9BQ96SB3 815 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 RRN3Q9NYV6 651 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 SERGEFQ9UGK8 458 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 KLK13Q9UKR3 277 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 TPX2Q9ULW0 747 aaKnown RBP17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 ANKRD6Q9Y2G4 727 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 PCDHB9Q9Y5E1 797 aa17.76■□□□□ 0.43
VPS9D1-203ENST00000563798 AKAP13Q12802 2813 aa17.75■□□□□ 0.43
VPS9D1-203ENST00000563798 A0A1W2PPC4 97 aa17.75■□□□□ 0.43
VPS9D1-203ENST00000563798 FLRT2O43155 660 aa17.75■□□□□ 0.43
VPS9D1-203ENST00000563798 FSBPO95073 299 aa17.75■□□□□ 0.43
VPS9D1-203ENST00000563798 C5AR1P21730 350 aa17.75■□□□□ 0.43
VPS9D1-203ENST00000563798 SLC8A1P32418 973 aa17.75■□□□□ 0.43
VPS9D1-203ENST00000563798 SCNN1AP37088 669 aa17.75■□□□□ 0.43
VPS9D1-203ENST00000563798 GABRB2P47870 512 aa17.75■□□□□ 0.43
VPS9D1-203ENST00000563798 AUHQ13825 339 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms